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A Method for Targeted 16S Sequencing of Human Milk Samples
Published on: March 23, 2018
Networks of human milk microbiota are associated with host genomics, childhood asthma, and allergic sensitization
Zhi Yi Fang1, Sara A Stickley1, Amirthagowri Ambalavanan1
1Department of Biomedical and Molecular Sciences, Queen's University, Kingston, ON K7L 3N6, Canada.
Insights
Maternal genomics influences the human milk microbiota (HMM), impacting infant asthma and atopy risk. Specific microbial patterns and diversity in HMM are linked to childhood allergies, highlighting a crucial connection.
Area of Science:
- Microbiology
- Genomics
- Pediatric Health
Background:
- The human milk microbiota (HMM) is crucial for infant development, but its connection to asthma and atopy is not fully understood.
- The influence of maternal genetics on HMM composition and its subsequent health implications requires further investigation.
Purpose of the Study:
- To investigate the association between maternal genomics, HMM composition, and the development of childhood asthma and atopy.
- To identify specific microbial patterns within HMM linked to allergic diseases in infants.
Main Methods:
- Longitudinal follow-up of 885 mother-offspring pairs from birth to 5 years within the CHILD Cohort Study.
- Analysis of HMM composition, microbial network analysis, and genome-wide association studies (GWASs).
- Assessment of childhood asthma and allergic sensitization (atopy) prevalence.
Main Results:
- HMM composition is associated with maternal genomics and the prevalence of childhood asthma and atopy.
- Specific microbial modules in HMM correlate with subsequent asthma and atopy.
- Reduced alpha-diversity and increased Lawsonella abundance in HMM are linked to higher childhood atopy rates.
- GWASs identified maternal genetic loci associated with HMM, Lawsonella, and alpha-diversity, implicating them in asthma and atopy.
Conclusions:
- Host genomics significantly shapes the HMM.
- HMM composition and diversity play a role in the development of childhood asthma and atopy.
- This research provides insights into the interplay between maternal genetics, the milk microbiome, and infant allergic outcomes.
Abstract:
The human milk microbiota (HMM) is thought to influence the long-term health of offspring. However, its role in asthma and atopy and the impact of host genomics on HMM composition remain unclear. Through the CHILD Cohort Study, we followed 885 pregnant mothers and their offspring from birth to 5 years and determined that HMM was associated with maternal genomics and prevalence of childhood asthma and allergic sensitization (atopy) among human milk-fed infants. Network analysis identified modules of correlated microbes in human milk that were associated with subsequent asthma and atopy in preschool-aged children. Moreover, reduced alpha-diversity and increased Lawsonella abundance in HMM were associated with increased prevalence of childhood atopy. Genome-wide association studies (GWASs) identified maternal genetic loci (e.g., ADAMTS8, NPR1, and COTL1) associated with HMM implicated with asthma and atopy, notably Lawsonella and alpha-diversity. Thus, our study elucidates the role of host genomics on the HMM and its potential impact on childhood asthma and atopy.
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