Novel KIF26A variants associated with pediatric intestinal pseudo-obstruction (PIPO) and brain developmental defects
Mohammad Sadegh Shams Nosrati1,2, Alireza Doustmohammadi3, Mariasavina Severino4
1Department of Neurosciences, Rehabilitation, Ophthalmology, Genetics, Maternal and Child Health, University of Genoa, Genoa, Italy.
Insights
Newly identified KIF26A gene variants cause congenital hydrocephalus, neurodevelopmental issues, and intestinal obstruction in children. This expands the known spectrum of KIF26A-related disorders, offering insights into rare pediatric conditions.
Area of Science:
- Genetics
- Neuroscience
- Pediatric Medicine
Background:
- Pediatric intestinal pseudo-obstruction (PIPO) is a rare congenital disorder affecting the enteric nervous system, potentially causing intestinal obstruction.
- Biallelic KIF26A variants have been linked to neurodevelopmental conditions with PIPO-like symptoms, but aganglionosis was not previously observed.
Purpose of the Study:
- To investigate the genetic basis and phenotypic spectrum of KIF26A-related disorders in three subjects presenting with congenital hydrocephalus, neurodevelopmental impairment, and intestinal obstruction.
Main Methods:
- Trio-exome sequencing (ES) was performed to identify genetic variants.
- Brain MRI was used to assess cortical malformations.
- Intestinal pathology confirmed aganglionosis and elevated acetylcholinesterase activity.
- 3D protein modeling (Alphafold3, YASARA) analyzed the impact of missense variants.
Main Results:
- Three subjects presented with congenital hydrocephalus, neurodevelopmental impairment, and intestinal obstruction with megacolon.
- Brain MRI revealed cortical dysplasia spectrum malformations, including polymicrogyria and heterotopia.
- Intestinal pathology showed aganglionosis and elevated acetylcholinesterase activity.
- Four novel biallelic KIF26A variants (two missense, two truncating) were identified, predicted to be deleterious.
- 3D protein modeling indicated structural destabilization for missense variants.
Conclusions:
- This study expands the known genotype and phenotype spectrum of KIF26A-related disorders.
- Novel KIF26A variants are associated with a complex phenotype including congenital hydrocephalus, neurodevelopmental impairment, and intestinal aganglionosis.
- KIF26A plays a critical role in enteric neural crest cell development and its dysfunction leads to severe congenital anomalies.
Abstract:
Pediatric intestinal pseudo-obstruction (PIPO) is a rare congenital disorder of the enteric nervous system with distal colon aganglionosis potentially leading to intestinal obstruction. Recently, biallelic variants in KIF26A, encoding a crucial motor protein for the migration and differentiation of enteric neural crest cells, have been associated with a neurodevelopmental condition featuring cortical defects and PIPO-like features, though in absence of aganglionosis. So far, only 10 patients have been reported. In this study, we investigated three subjects with congenital hydrocephalus, neurodevelopmental impairment, and intestinal obstruction megacolon syndrome. Brain MRI revealed malformations within cortical dysplasia spectrum, including polymicrogyria and heterotopia. Pathology study of the intestine revealed aganglionosis and elevated acetylcholinesterase activity in parasympathetic nerve fibers. Through trio-exome sequencing (ES), we detected four novel biallelic KIF26A variants, including two missense changes (#1) and two distinct homozygous truncating variants in (#2 and #3). All variants are rare and predicted to be deleterious according to in silico tools. To characterize the impact of the missense variants, we performed 3D protein modeling using Alphafold3 and YASARA. Mutants exhibited increased energy scores compared to wild-type protein, supporting a significant structural destabilization of the protein. Our study expands the genotype and phenotype spectrum of the emerging KIF26A-related disorder.
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