CHAMP: A Centrifugal Microfluidics-Based CRISPR/Cas12b-Combined Real-Time LAMP One-Pot Method for Mycoplasma

Wenwen Jing1, Tong Zhang2, Xiangyang Min3

  • 1Department of Medical Microbiology and Parasitology, School of Basic Medical Sciences, Fudan University, Shanghai 200032, P. R. China.

ACS Omega
|September 23, 2024
PubMed

Insights

A new CHAMP system rapidly diagnoses Mycoplasma pneumoniae infections using CRISPR/Cas12b and LAMP technology. This user-friendly method offers a faster, more accurate clinical diagnostic alternative for M. pneumoniae detection.

Area of Science:

  • Medical Diagnostics
  • Molecular Biology
  • Biotechnology

Background:

  • Mycoplasma pneumoniae outbreaks present significant public health risks.
  • Current diagnostic methods like qPCR and IgM immunoassays have limitations, including cost, time, and accuracy.
  • There is a critical need for improved, rapid, and accessible clinical diagnostic tools.

Purpose of the Study:

  • To develop and validate a novel, user-friendly centrifugal microfluidics-based diagnostic system for Mycoplasma pneumoniae infections.
  • To enhance diagnostic speed, sensitivity, and specificity compared to existing methods.
  • To provide a simplified workflow for clinical settings.

Main Methods:

  • Development of the CHAMP system, integrating CRISPR/Cas12b with real-time loop-mediated isothermal amplification (LAMP) in a one-pot reaction.
  • Utilizing a prepackaged centrifugal microfluidics chip for automated sample processing and testing.
  • Validation using 427 clinical nasopharyngeal swab specimens.

Main Results:

  • The CHAMP system demonstrated high sensitivity, specificity, and simplicity.
  • Simultaneous automated testing of 48 samples was achieved within 15 to 60 minutes at 60 °C.
  • The method showed good positive and negative predictive values and significant time savings.
  • Effective detection of low nucleic acid copies of Mycoplasma pneumoniae was confirmed.

Conclusions:

  • The novel CHAMP system offers a rapid, sensitive, and specific diagnostic solution for Mycoplasma pneumoniae infections.
  • This user-friendly, microfluidics-based approach addresses limitations of current clinical diagnostic methods.
  • The CHAMP system is well-suited for widespread clinical application, especially for detecting low pathogen loads.