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Convolutional neural networks applied to differential dynamic microscopy reduces noise when quantifying heterogeneous

Gildardo Martinez1, Justin Siu1, Steven Dang1

  • 1Department of Physics and Biophysics, University of San Diego, San Diego, CA 92110, USA. rmcgorty@sandiego.edu.

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Summary

This study introduces a machine learning method to reduce noise in differential dynamic microscopy (DDM) analysis, enabling accurate motion quantification even with limited imaging frames or rapidly changing dynamics.

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Area of Science:

  • Soft matter physics
  • Biophysics
  • Materials science

Background:

  • Differential dynamic microscopy (DDM) requires extensive imaging data for accurate motion quantification in soft matter.
  • Short or dynamic imaging sequences yield noisy and unreliable DDM results, limiting applications.

Purpose of the Study:

  • To develop and validate a machine learning-based denoising method for DDM.
  • To improve DDM accuracy with limited frames and capture fast-evolving dynamics.

Main Methods:

  • A convolutional neural network encoder-decoder (CNN-ED) model was employed to denoise the intermediate scattering function computed via DDM.
  • The method was tested on colloidal particle suspensions undergoing gelation and exhibiting viscosity gradients.

Main Results:

  • The CNN-ED model effectively reduced noise in DDM analysis, even with limited imaging frames.
  • Accurate quantification of particle diffusivity was achieved during fluid gelation and across viscosity gradients.
  • The denoising approach successfully captured time-varying and spatially varying particle dynamics.

Conclusions:

  • Machine learning-enhanced DDM provides a robust solution for analyzing complex dynamics in soft matter systems.
  • This method expands the applicability of DDM to scenarios with limited data or non-equilibrium conditions.
  • The approach holds promise for high-throughput screening and studying dynamic processes.