Related Experiment Video
Updated: Jun 12, 2025

08:45
Characterizing RNA Modifications in Single Neurons Using Mass Spectrometry
Published on: April 21, 2022
2.3K
Modulation of m6A RNA modification by DAP3 in cancer cells
Jian Han1, Yangyang Song1, Jinghe Xie1
1Cancer Science Institute of Singapore, 8, Singapore 117599, Singapore.
Summary
Death associated protein 3 (DAP3) maintains cancer m6A RNA methylation by facilitating METTL3 binding and increasing S-adenosylmethionine (SAM) levels. DAP3 acts as an RNA-binding protein and tumor promoter, impacting cancer transcriptomes.
Area of Science:
- Molecular Biology
- Cancer Research
- Epigenetics
Background:
- N6-methyladenosine (m6A) RNA methylation is a critical epigenetic modification influencing RNA metabolism and cancer progression.
- Cellular m6A levels depend on RNA accessibility to methyltransferases and the availability of the methyl donor, S-adenosylmethionine (SAM).
Purpose of the Study:
- To investigate the role of death associated protein 3 (DAP3) in regulating m6A RNA methylation and its impact on cancer development.
- To elucidate the mechanisms by which DAP3 influences m6A levels and tumorigenesis.
Main Methods:
- Investigated DAP3's interaction with m6A target regions and its effect on METTL3 binding.
- Analyzed DAP3's role in MAT2A gene splicing and its influence on cellular SAM levels.
- Assessed the impact of DAP3 silencing and MAT2A overexpression on tumorigenesis in cancer cells.
Main Results:
- DAP3 directly binds to m6A target regions, enhancing METTL3 binding and facilitating m6A modification.
- DAP3 promotes MAT2A pre-mRNA splicing, leading to increased MAT2A protein, cellular SAM, and global m6A levels.
- Silencing DAP3 inhibits tumorigenesis, an effect that can be reversed by overexpressing MAT2A.
Conclusions:
- DAP3 plays a significant role in preserving m6A RNA methylation levels in cancer cells through dual mechanisms.
- DAP3 functions as an RNA-binding protein and a tumor promoter, influencing RNA processing, splicing, and m6A modification in cancer transcriptomes.
- Targeting DAP3 may offer a therapeutic strategy for cancer, potentially by modulating m6A regulation.
Related Concept Videos
Pre-mRNA Processing: Modification of pre-mRNA Ends
9.2K
In eukaryotic cells, transcripts made by RNA polymerase are modified and processed before exiting the nucleus. Unprocessed RNA is called precursor mRNA or pre-mRNA to distinguish it from mature mRNA.
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a cap to the 5' end of the growing transcript. In this process, a 5' phosphate is replaced by modified guanosine that has a methyl group attached (7-methyl guanosine). This 5' cap helps...
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a cap to the 5' end of the growing transcript. In this process, a 5' phosphate is replaced by modified guanosine that has a methyl group attached (7-methyl guanosine). This 5' cap helps...
9.2K
RNA Editing
8.9K
RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
8.9K
Abnormal Proliferation
4.5K
Under normal conditions, most adult cells remain in a non-proliferative state unless stimulated by internal or external factors to replace lost cells. Abnormal cell proliferation is a condition in which the cell's growth exceeds and is uncoordinated with normal cells. In such situations, cell division persists in the same excessive manner even after cessation of the stimuli, leading to persistent tumors. The tumor arises from the damaged cells that replicate to pass the damage to the...
4.5K
MicroRNAs
21.2K
MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After...
21.2K
mTOR Signaling and Cancer Progression
3.8K
The mammalian target of rapamycin or mTOR protein was discovered in 1994 due to its direct interaction with rapamycin. The protein gets its name from a yeast homolog called TOR. The mTOR protein complex in mammalian cells plays a major role in balancing anabolic processes such as the synthesis of proteins, lipids, and nucleotides and catabolic processes, such as autophagy in response to environmental cues, such as availability of nutrients and growth factors.
The mTOR pathway or the...
The mTOR pathway or the...
3.8K
Regulation of Expression at Multiple Steps
875
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
875

