NR0B2 Is a Key Factor for Gastric Diseases: A GEO Database Analysis Combined with Drug-Target Mendelian Randomization

Zhengwen Li1, Lijia Xu1, Dongliang Huang1

  • 1School of Pharmacy, Chengdu University, 2025 Chengluo Avenue, Chengdu 610106, China.

Genes
|September 28, 2024
PubMed

Insights

Small Heterodimer Partner (SHP; NR0B2) expression is linked to gastric diseases, with lower levels in gastric cancer and higher levels in gastritis. This study confirms SHP

Area of Science:

  • Genomics and Bioinformatics
  • Molecular Biology
  • Oncology

Background:

  • Small Heterodimer Partner (SHP; NR0B2) is an orphan nuclear receptor regulating metabolic processes and a potential cancer therapeutic target.
  • Investigating NR0B2's role in gastric diseases may reveal new treatment and drug development avenues.

Purpose of the Study:

  • To explore the correlation between NR0B2 gene expression and the risk of gastric diseases.
  • To identify potential therapeutic targets within NR0B2 pathways for gastric disease treatment.

Main Methods:

  • Utilized the Gene Expression Omnibus (GEO) database for NR0B2 expression profiles in gastric diseases.
  • Employed Weighted Correlation Network Analysis (WGCNA) for co-expressed genes and Gene Ontology (GO) enrichment analysis for pathway identification.
  • Applied Xcell method for immune infiltration analysis and Mendelian Randomization (MR) to assess causal relationships.

Main Results:

  • NR0B2 expression was reduced in gastric cancer and increased in gastritis.
  • GO and Gene Set Enrichment Analysis (GSEA) indicated NR0B2's involvement in oxidation-related processes.
  • Low NR0B2 expression correlated with poor gastric cancer prognosis and a causal relationship was established between NR0B2 expression and gastric disease risk.

Conclusions:

  • Confirmed a causal link between NR0B2 expression and the risk of gastric diseases, including gastric cancer, ulcer, and gastritis.
  • Highlighted NR0B2's role in gastric cancer progression and its association with Treg immune cells.
  • Suggests NR0B2 as a potential therapeutic target for modulating gastric disease progression.

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