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Machine learning assisted crystallographic reconstruction from atom probe tomographic images.

Jie-Ming Pu1, Shuai Chen1,2, Tong-Yi Zhang1,2,3

  • 1Materials Genome Institute, Shanghai University, Shanghai 200444, People's Republic of China.

Journal of Physics. Condensed Matter : an Institute of Physics Journal
|September 30, 2024
PubMed
Summary

This study introduces a new machine learning approach using deep learning models to reconstruct crystallographic information from atom probe tomography (APT) data, significantly improving nanoscale material analysis.

Keywords:
atom probe tomographyconvolutional neural networkhigh-throughput simulationmachine learningvariational autoencodervision of transformer

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Area of Science:

  • Materials Science
  • Data Science
  • Crystallography

Background:

  • Atom probe tomography (APT) provides 3D atomic-scale compositional analysis but struggles with accurate crystallographic reconstruction.
  • Recovering precise crystallographic information from APT data remains a significant challenge due to the technique's inherent limitations.

Purpose of the Study:

  • To develop and validate a novel computational approach for reconstructing crystallographic information from APT data.
  • To leverage deep learning for enhanced analysis of nanoscale materials using APT.

Main Methods:

  • A modified forward simulation process generated a large dataset (100,000 images) of Al single crystals.
  • Three deep learning models—Convolutional Neural Network (CNN), Vision Transformer (ViT), and Variational Autoencoder (VAE)—were trained for crystal reconstruction.
  • The Vision Transformer (ViT) model demonstrated superior performance in recovering crystalline orientation.

Main Results:

  • The ViT model achieved high accuracy in recovering crystallographic orientation, with R² values of 0.93, 0.97, and 0.93 for rotation angles φ, ψ, and θ, respectively.
  • Mean Percent Errors (MPE) were as low as 0.35% for the ψ angle, indicating precise orientation recovery.
  • The study validates the effectiveness of deep learning in extracting detailed crystallographic data from APT.

Conclusions:

  • Deep learning models, particularly ViT, can effectively recover crystallographic information from APT data.
  • This approach overcomes previous limitations in APT data analysis, enabling more accurate nanoscale material characterization.
  • The findings pave the way for advanced artificial intelligence applications in atom probe tomography.