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Very-Large-Scale GPU-Accelerated Nuclear Gradient of Time-Dependent Density Functional Theory with Tamm-Dancoff
Inkoo Kim1,2, Daun Jeong1, Leah P Weisburn2
1Innovation Center, Samsung Electronics, Hwaseong 18448, Republic of Korea.
We developed a fast, multi-GPU method for calculating nuclear gradients in time-dependent density functional theory (TDDFT). This approach accelerates complex quantum chemistry simulations on modern high-performance computing systems.
Area of Science:
- Computational Chemistry
- Quantum Mechanics
- High-Performance Computing
Background:
- Modern graphics processing units (GPUs) offer significant computational power.
- Accurate calculation of molecular properties requires efficient theoretical methods.
Purpose of the Study:
- To present a high-performance, multi-GPU implementation of analytical nuclear gradients for Kohn-Sham time-dependent density functional theory (TDDFT).
- To demonstrate the algorithm's efficiency on large-scale systems.
Main Methods:
- Implementation of multi-GPU algorithms for TDDFT nuclear gradients using the Tamm-Dancoff approximation (TDA) and Gaussian-type atomic orbitals.
- Development of GPU-efficient algorithms for derivatives of electron repulsion integrals and exchange-correlation functionals.
- Application to a large biomolecule (green fluorescent protein) with explicit solvent.
Main Results:
- The TDA-TDDFT gradient calculation for a 4353-atom system was performed.
- Favorable parallel efficiencies were achieved on 256 Nvidia A100 GPUs, with >70% efficiency up to 64 GPUs and 31% with 256 GPUs.
Conclusions:
- The developed multi-GPU implementation effectively leverages high-performance computing resources.
- This method significantly accelerates quantum chemistry calculations for large molecular systems.
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