The novel selective inhibitors of cyclin-dependent kinase 4/6: in vitro and in silico study

Ni Made Pitri Susanti1,2, Fransiska Kurniawan1, Sophi Damayanti1

  • 1School of Pharmacy, Bandung Institute of Technology, Bandung, 40132, Indonesia.

Scientific Reports
|October 8, 2024
PubMed

Insights

Four compounds were evaluated as potential cyclin-dependent kinase 4 and 6 (CDK4/6) inhibitors. ZINC585291674 demonstrated the best inhibitory activity and selectivity, showing promise for further development in breast cancer treatment.

Area of Science:

  • Oncology
  • Medicinal Chemistry
  • Molecular Biology

Background:

  • Cyclin-dependent kinase 4 and 6 (CDK4/6) are key cell cycle regulators.
  • CDK4/6 inhibitors are FDA-approved for metastatic breast cancer.
  • Developing selective CDK4/6 inhibitors is challenging due to conserved ATP binding sites.

Purpose of the Study:

  • To analyze the in vitro selectivity and inhibitory activity of four previously identified potential CDK4/6 inhibitors.
  • To further evaluate their development potential using in silico methods.
  • To identify a lead compound for future drug development.

Main Methods:

  • In vitro assays to assess selectivity and inhibitory activity against CDK4/6.
  • In silico analysis to predict development potential.
  • ADMET profiling compared to Palbociclib.

Main Results:

  • All four compounds exhibited good selectivity for CDK4/6 due to structural similarity.
  • ZINC585291674 showed the most potent inhibition with IC50 values of 184.14 nM (CDK4) and 111.78 nM (CDK6).
  • The compounds' ADMET profiles were comparable to the reference drug Palbociclib.

Conclusions:

  • ZINC585291674 is a promising lead compound for developing novel CDK4/6 inhibitors.
  • The study validates the potential of ZINC585291674 for further preclinical and clinical development.
  • This research contributes to the ongoing effort to find more effective treatments for breast cancer.

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