Related Experiment Video
Updated: Jun 12, 2025

Co-immunoprecipitation of the Mouse Mx1 Protein with the Influenza A Virus Nucleoprotein
Published on: April 21, 2015
Cellular NS1-BP protein interacts with the mRNA export receptor NXF1 to mediate nuclear export of influenza virus M
Ke Zhang1, Tolga Cagatay2, Dongqi Xie2
1Department of Cell Biology, University of Texas Southwestern Medical Center, Dallas, Texas, USA; Shanghai Institute of Immunity and Infection, Chinese Academy of Sciences, Shanghai, China.
Abstract:
Influenza A viruses have eight genomic RNAs that are transcribed in the host cell nucleus. Two of the viral mRNAs undergo alternative splicing. The M1 mRNA encodes the matrix protein 1 (M1) and is also spliced into M2 mRNA, which encodes the proton channel matrix protein 2 (M2). Our previous studies have shown that the cellular Non-Structural protein 1 (NS1)-binding protein (NS1-BP) interacts with the viral NS1 and M1 mRNA to promote M1 to M2 splicing. Another pool of NS1 protein binds the mRNA export receptor nuclear RNA export factor-1 (NXF1), leading to nuclear retention of cellular mRNAs. Here, we show a series of biochemical and cell biological findings that suggest a model for nuclear export of M1 and M2 mRNAs despite the mRNA nuclear export inhibition imposed by the viral NS1 protein. NS1-BP competes with NS1 for NXF1 binding, allowing the recruitment of NXF1 to the M mRNAs after splicing. NXF1 then binds germinal center-associated nuclear protein, a member of the transcription and export complex-2. Although both NS1 and NS1-BP remain in complex with germinal center-associated nuclear protein-NXF1, they dissociate once this complex docks at the nuclear pore complex, and the M mRNAs are translocated to the cytoplasm. Since this mRNA nuclear export pathway is key for expression of M1 and M2 proteins that function in viral intracellular trafficking and budding, these viral-host interactions are critical for influenza virus replication.
Insights
Influenza virus NS1 protein normally blocks mRNA export. However, NS1-binding protein (NS1-BP) facilitates M1 and M2 mRNA export by competing for export factors, enabling viral replication.
Area of Science:
- Virology
- Molecular Biology
- Cell Biology
Background:
- Influenza A viruses utilize host cell machinery for replication, including nuclear transcription and mRNA processing.
- Viral non-structural protein 1 (NS1) interferes with host mRNA export, while NS1-binding protein (NS1-BP) promotes M1 to M2 splicing.
- NS1 binds mRNA export receptor nuclear RNA export factor-1 (NXF1), inhibiting cellular mRNA export.
Purpose of the Study:
- To elucidate the mechanism by which M1 and M2 mRNAs are exported from the nucleus despite NS1-mediated inhibition.
- To investigate the role of NS1-BP in the nuclear export of viral M1 and M2 mRNAs.
Main Methods:
- Biochemical assays to study protein-protein and protein-RNA interactions.
- Cell biological techniques to visualize and track mRNA and protein localization within infected cells.
- Analysis of viral replication in the presence and absence of key interacting proteins.
Main Results:
- NS1-BP competes with NS1 for binding to NXF1, enabling NXF1 recruitment to M mRNAs.
- The complex of NS1-BP, NS1, NXF1, and germinal center-associated nuclear protein facilitates M mRNA export.
- Dissociation of viral proteins occurs at the nuclear pore complex, allowing M mRNA translocation to the cytoplasm.
Conclusions:
- A novel pathway for viral mRNA nuclear export is described, overcoming NS1-mediated inhibition.
- NS1-BP acts as a crucial viral host factor, mediating M mRNA export for viral replication.
- Understanding these viral-host interactions is critical for developing antiviral strategies against influenza.
Related Concept Videos
Nuclear Export
NES are of three types- the canonical 10-residue long leucine-rich signal and other...
Nuclear Export of mRNA
Leaky Scanning
Regulated mRNA Transport
Nuclear Protein Sorting
Proteins targeted to the nucleus carry nuclear localization signals or NLS recognized by import receptors in the cytosol. Similarly, proteins with nuclear export signals are recognized by export receptors. Import and export receptors are...
Regulation of Nuclear Protein Sorting

