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Published on: September 26, 2019
Mild atopic dermatitis is characterized by increase in non-staphylococcus pathobionts and loss of specific species
Lize Delanghe1, Ilke De Boeck1, Joke Van Malderen1
1Department of Bioscience Engineering, University of Antwerp, Groenenborgerlaan 171, Antwerpen, B-2020, Belgium.
Abstract:
Atopic dermatitis is the most common inflammatory skin condition with a severe negative impact on patients' quality of life. The etiology of AD is complex and depends on age, genetics, the immune system, environmental factors, and the skin microbiome, with a key role for pathogenic Staphylococcus aureus in the development of severe AD. However, the composition of the skin microbiome in mild AD is understudied. Here, using metagenomic shallow shotgun sequencing, we showed that mild AD lesions did not show a significant difference in the diversity of the skin microbiome compared to samples from non-AD patients and that the relative abundance of S. aureus did not differ in these mild AD lesions. However, when we assessed other taxa, Mycobacterium ostraviense, Pedobacter panaciterrae_A and four Streptomyces species were identified with higher abundances in mild AD lesions and species of 15 genera were decreased in abundance. The highest fold decreases were observed for Paracoccus marcusii, Microbacterium lacticum, Micrococcus luteus, and Moraxella sp002478835. These microbiome compositional insights are a first step towards novel microbiome-based diagnostics and therapeutics for early intervention at the stage of mild AD and provide a path forward for the functional study of species involved in this often-overlooked patient population.
Insights
Mild atopic dermatitis (AD) skin microbiome composition differs from healthy skin. Specific bacteria increase, while others decrease, offering potential for early AD diagnostics and treatments.
Area of Science:
- Microbiology
- Dermatology
- Genomics
Background:
- Atopic dermatitis (AD) significantly impacts quality of life.
- The skin microbiome's role in mild AD remains understudied.
- Staphylococcus aureus is implicated in severe AD, but its role in mild AD is unclear.
Purpose of the Study:
- To investigate the skin microbiome composition in mild AD lesions.
- To identify bacterial taxa that differ in abundance between mild AD and healthy skin.
- To explore potential targets for early AD intervention.
Main Methods:
- Metagenomic shallow shotgun sequencing was employed.
- Skin microbiome samples were collected from mild AD lesions and healthy controls.
- Bacterial taxa abundance was compared between groups.
Main Results:
- No significant difference in overall skin microbiome diversity was observed between mild AD and healthy skin.
- Relative abundance of Staphylococcus aureus did not differ in mild AD lesions.
- Increased abundance of Mycobacterium ostraviense, Pedobacter panaciterrae_A, and four Streptomyces species in mild AD.
- Decreased abundance of 15 genera, including Paracoccus marcusii, Microbacterium lacticum, Micrococcus luteus, and Moraxella sp002478835.
Conclusions:
- Mild AD skin microbiome shows distinct compositional changes beyond S. aureus.
- These findings provide a basis for developing microbiome-based diagnostics for early AD detection.
- Further research into the functional roles of altered taxa can guide novel therapeutic strategies for mild AD.
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