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Development of Machine Learning-Based Mpox Surveillance Models in a Learning Health System
Harry Reyes Nieva1,2, Jason Zucker1,3,4, Emma Tucker5
1Department of Biomedical Informatics, Columbia University, New York, NY, USA.
Machine learning models were developed to detect mpox cases in clinical notes. Lasso regression proved superior to deep learning, effectively reducing false positives for improved quality improvement.
Area of Science:
- Computational epidemiology
- Medical informatics
- Machine learning in healthcare
Background:
- The accurate and timely identification of mpox cases is crucial for public health surveillance and patient management.
- Clinical notes contain valuable information for disease detection but require sophisticated methods for analysis.
- Learning health systems aim to integrate data-driven insights into clinical practice for continuous improvement.
Purpose of the Study:
- To develop and evaluate machine learning and deep learning models for identifying mpox cases from unstructured clinical notes.
- To compare the performance of different modeling approaches, specifically Lasso regression and deep learning, in detecting mpox.
- To assess the utility of these models in a learning health system for quality improvement initiatives.
Main Methods:
- Development of machine learning (Lasso regression) and deep learning models.
- Training and validation of models using a dataset of clinical notes.
- Evaluation of model performance metrics, with a focus on accuracy and false positive rates.
Main Results:
- Lasso regression demonstrated superior performance compared to deep learning models in identifying mpox cases.
- The Lasso regression model was particularly effective in minimizing false positive identifications.
- The developed models show potential for integration into a learning health system.
Conclusions:
- Machine learning, specifically Lasso regression, offers a viable and effective approach for identifying mpox from clinical notes.
- The ability of Lasso regression to minimize false positives makes it a valuable tool for quality improvement, potentially aiding in the detection of missed or delayed diagnoses.
- These findings support the use of computational methods in learning health systems for enhanced disease surveillance and clinical quality improvement.
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