Related Experiment Video
Updated: Jun 10, 2025

In Vitro Analysis of E3 Ubiquitin Ligase Function
Published on: May 14, 2021
Rapid turnover of CTLA4 is associated with a complex architecture of reversible ubiquitylation
Pei Yee Tey1, Almut Dufner2,3, Klaus-Peter Knobeloch2,3
1Biochemistry, Cell and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool , Liverpool, UK.
Abstract:
The immune checkpoint regulator CTLA4 is an unusually short-lived membrane protein. Here, we show that its lysosomal degradation is dependent on ubiquitylation at lysine residues 203 and 213. Inhibition of the v-ATPase partially restores CTLA4 levels following cycloheximide treatment, but also reveals a fraction that is secreted in exosomes. The endosomal deubiquitylase, USP8, interacts with CTLA4, and its loss enhances CTLA4 ubiquitylation in cancer cells, mouse CD4+ T cells, and cancer cell-derived exosomes. Depletion of the USP8 adapter protein, HD-PTP, but not ESCRT-0 recapitulates this cellular phenotype but shows distinct properties vis-à-vis exosome incorporation. Re-expression of wild-type USP8, but neither a catalytically inactive nor a localization-compromised ΔMIT domain mutant can rescue delayed degradation of CTLA4 or counteract its accumulation in clustered endosomes. UbiCRest analysis of CTLA4-associated ubiquitin chain linkages identifies a complex mixture of conventional Lys63- and more unusual Lys27- and Lys29-linked polyubiquitin chains that may underly the rapidity of protein turnover.
Insights
Cytotoxic T-lymphocyte-associated protein 4 (CTLA4) degradation is regulated by ubiquitylation and the deubiquitylase USP8. Loss of USP8 accelerates CTLA4 ubiquitylation and turnover, impacting its cellular levels and exosome secretion.
Area of Science:
- Immunology
- Cell Biology
- Molecular Biology
Background:
- Cytotoxic T-lymphocyte-associated protein 4 (CTLA4) is a key immune checkpoint regulator.
- CTLA4 is a short-lived membrane protein, suggesting rapid degradation pathways.
Purpose of the Study:
- To investigate the molecular mechanisms governing CTLA4 degradation.
- To identify proteins involved in regulating CTLA4 stability and turnover.
Main Methods:
- Ubiquitylation analysis at specific lysine residues (203 and 213).
- v-ATPase inhibition and cycloheximide treatment to assess CTLA4 stability.
- Exosome isolation and analysis.
- Depletion and re-expression studies of USP8 and HD-PTP.
- UbiCRest analysis of ubiquitin chain linkages.
Main Results:
- CTLA4 degradation is dependent on ubiquitylation at K203 and K213.
- USP8 interacts with CTLA4 and its loss enhances CTLA4 ubiquitylation and degradation.
- HD-PTP depletion mimics USP8 loss effects on CTLA4 ubiquitylation.
- CTLA4 is also secreted in exosomes, a process influenced by USP8.
- UbiCRest identified mixed ubiquitin chain linkages (Lys63, Lys27, Lys29) on CTLA4.
Conclusions:
- USP8 plays a critical role in regulating CTLA4 stability and degradation through ubiquitylation.
- Distinct ubiquitin chain linkages may contribute to CTLA4's rapid turnover.
- Understanding CTLA4 regulation is crucial for immunotherapy and immune response modulation.
Related Concept Videos
Regulated Protein Degradation
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
Covalently Linked Protein Regulators
These groups modify specific amino acids in a protein....
Receptor Downregulation in MVBs
The EGFR can initiate signaling pathways that lead to cell proliferation, migration, and differentiation. Overexpression of EGFR stimulates cells to proliferate. Excessive EGFR...
Anaphase Promoting Complex
T Cell Activation and Clonal Selection
Naive T cells that have not yet encountered an antigen express two primary CD...
Protein Complexes with Interchangeable Parts
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...

