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Spatiotemporal Cluster Detection for COVID-19 Outbreak Surveillance: Descriptive Analysis Study.
Rachel Martonik1, Caitlin Oleson2, Ellyn Marder2
1Deloitte, Arlington, VA, United States.
JMIR Public Health and Surveillance
|October 16, 2024
Summary
A new space-time permutation model systematically detected COVID-19 clusters in Washington State, improving early identification of outbreaks in high-priority settings like schools and workplaces for timely public health intervention.
Area of Science:
- Epidemiology
- Public Health Surveillance
- Statistical Modeling
Background:
- During winter 2020-2021, Washington State faced numerous COVID-19 outbreaks, primarily in workplaces, community settings, and schools.
- Existing detection methods, like automated address matching for healthcare facilities, were insufficient for systematic statewide outbreak identification, leading to delays and incomplete data.
Purpose of the Study:
- To implement and assess a systematic, statewide cluster detection model for timely identification of COVID-19 clusters.
- The model aimed to aid local health jurisdictions (LHJs) in investigations and resource prioritization.
Main Methods:
- A pilot study involving 6 LHJs tested parameters like analysis type, geographic aggregation, cluster radius, and data lag.
- A weekly, LHJ-specific retrospective space-time permutation model was implemented statewide from July 17 to December 17, 2021.
- Detected clusters were analyzed by LHJ population and disease incidence, and compared with reported outbreaks.
Main Results:
- The model identified 2874 new COVID-19 clusters statewide.
- Over 58% of identified clusters were timely, occurring within one week of analysis, allowing for early intervention.
- While 363 reported outbreaks matched SaTScan clusters, the model identified approximately one-third of these before they were recognized in the surveillance system.
Conclusions:
- The space-time permutation model successfully identified timely and actionable COVID-19 clusters statewide, irrespective of population or incidence.
- The model demonstrated effectiveness in detecting clusters in high-priority settings like schools and community settings, matching reported outbreaks.
- Results suggest the model may offer earlier outbreak detection in workplaces compared to existing methods.
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