Molecular basis for the transcriptional regulation of an epoxide-based virulence circuit in Pseudomonas aeruginosa

  • 0Department of Biochemistry and Cell Biology, Geisel School of Medicine at Dartmouth, Hanover, NH 03755, USA.

|

|

Summary

This summary is machine-generated.

Pseudomonas aeruginosa uses a virulence factor, Cif, to worsen cystic fibrosis outcomes. Researchers discovered how the CifR regulator senses epoxides to control Cif expression, revealing new therapeutic targets.

Area Of Science

  • Microbiology
  • Structural Biology
  • Molecular Biology

Background

  • * Pseudomonas aeruginosa is an opportunistic pathogen causing severe cystic fibrosis (CF) lung infections.
  • * The Cif virulence factor, an epoxide hydrolase, exacerbates CF disease by reducing CFTR and impairing resolution.
  • * Cif expression is controlled by the TetR family repressor, CifR, the first identified epoxide-sensing bacterial regulator.

Purpose Of The Study

  • * To elucidate the molecular mechanisms governing the Pseudomonas aeruginosa Cif virulence operon.
  • * To investigate the interaction between CifR and its operator DNA.
  • * To understand the activation mechanism of CifR in response to epoxide signaling.

Main Methods

  • * Biochemical assays to study protein-DNA interactions and epoxide sensing.
  • * X-ray crystallography to determine the structures of CifR alone and bound to operator DNA.
  • * Structure-based analysis to identify key residues and conformational changes.

Main Results

  • * Determined the first molecular structures of CifR alone and in complex with operator DNA.
  • * Revealed significant conformational changes in CifR upon DNA binding, explaining gene regulation.
  • * Identified the N-terminal extension of CifR as crucial for operator DNA recognition.
  • * Demonstrated that Cys107 is essential for epoxide sensing and subsequent DNA release.

Conclusions

  • * Uncovered the molecular basis for epoxide-mediated regulation of the Cif virulence factor in Pseudomonas aeruginosa.
  • * Provided structural insights into CifR's DNA binding and conformational switching mechanism.
  • * Highlighted Cys107 as a key residue for sensing and signaling pathway activation.
  • * Established a foundation for developing novel therapeutic strategies targeting this critical virulence circuit.

Related Concept Videos

Gene Regulation in Microbial Communities: Quorum Sensing 01:28

3

Quorum sensing is a mechanism of bacterial communication that enables coordinated gene expression in response to changes in population density. This facilitates collective behaviors that enhance survival, resource acquisition, and ecological adaptation. This process relies on small signaling molecules called autoinducers that accumulate as bacterial populations grow. When a critical threshold concentration of autoinducers is reached, bacterial cells collectively modify gene expression,...

Prokaryotic Transcriptional Activators and Repressors 01:58

20.8K

The organization of prokaryotic genes in their genome is notably different from that of eukaryotes. Prokaryotic genes are organized, such that the genes for proteins involved in the same biochemical process or function are located together in groups. This group of genes, along with their regulatory elements, are collectively known as an operon. The functional genes in an operon are transcribed together to give a single strand of mRNA known as polycistronic mRNA.
Transcription of prokaryotic...

Global Regulatory Systems 01:28

2

Global regulatory systems in bacteria enable rapid and coordinated responses to environmental changes by integrating sensory inputs with gene expression, ensuring efficient adaptation to fluctuating conditions. Key global regulatory mechanisms include regulons, two-component systems, sigma factors, and secondary messengers.Regulons and Global RegulatorsA regulon is a collection of genes and operons controlled by a common global regulator. These regulators enable bacteria to prioritize resource...

Transcription Attenuation in Prokaryotes 02:42

15.2K

Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure.  Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
There are several different mechanisms used to attenuate transcription. In ribosome mediated...

Repressible Operon: <i>trp</i> Operon 01:21

3

The trp operon in Escherichia coli exemplifies a repressible operon. It regulates the synthesis of tryptophan through repressor-mediated transcriptional control and attenuation. This dual regulatory mechanism ensures tryptophan biosynthesis occurs only when needed, conserving cellular resources.Structure of the trp OperonThe trp operon consists of five structural genes (trpE, trpD, trpC, trpB, and trpA) that encode enzymes for tryptophan biosynthesis. These genes are transcribed as a single...

Operon Model 01:23

2

The operon model represents a fundamental mechanism of gene regulation in prokaryotes, enabling coordinated expression of genes involved in related metabolic or functional pathways. Operons consist of structural genes, a promoter, and an operator, with transcription regulated by repressors, activators, and small effector molecules.Structure and Function of OperonsAn operon is a cluster of structural genes transcribed together under the control of a single promoter. The promoter region...