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Multiparametric MRI Radiomics With Machine Learning for Differentiating HER2-Zero, -Low, and -Positive Breast Cancer:
Yongxin Chen1, Siyi Chen1, Wenjie Tang1
1Department of Radiology, Guangzhou First People's Hospital, No. 1 Panfu Rd, Guangzhou, 510180 China.
MRI radiomics models show suboptimal performance for classifying HER2 expression levels in breast cancer. Shapley additive explanation (SHAP) analysis revealed early dynamic contrast-enhanced (DCE) imaging features were most influential.
Area of Science:
- Oncology
- Radiology
- Machine Learning
Background:
- MRI radiomics is being explored for classifying HER2 expression in breast cancer.
- Understanding the predictive mechanisms of these models is crucial.
Purpose of the Study:
- To develop and test multiparametric MRI radiomics machine learning models for three-tiered HER2 expression classification.
- To interpret model predictions using SHAP analysis.
Main Methods:
- Retrospective study of 737 breast cancer patients from two centers.
- Radiomic features extracted from DCE, T2-weighted, and DWI MRI.
- Support vector machine (SVM) for feature selection and radiomics score (radscore) computation.
- SHAP analysis for local and global model interpretation.
Main Results:
- In the external test set, the combined model achieved an AUC of 0.762 for differentiating HER2-negative from HER2-positive tumors.
- For differentiating HER2-zero from HER2-low tumors, the radscore achieved an AUC of 0.754.
- SHAP analysis highlighted early DCE imaging features as most influential for both tasks.
Conclusions:
- MRI radiomics models demonstrate suboptimal performance for noninvasive HER2 expression characterization.
- SHAP analysis offers valuable insights into the predictions of imaging-based machine learning models.
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