Proteogenomic Landscape of Breast Ductal Carcinoma Reveals Tumor Progression Characteristics and Therapeutic Targets
- Ganfei Xu 1, Juan Yu 1, Jiacheng Lyu 1, Mengna Zhan 1, Jie Xu 1, Minjing Huang 1, Rui Zhao 2, Yan Li 1, Jiajun Zhu 1, Jinwen Feng 1, Subei Tan 1, Peng Ran 1, Zhenghua Su 1, Xinhua Liu 1, Jianyuan Zhao 2, Hongwei Zhang 1, Chen Xu 1, Jun Chang 1, Yingyong Hou 1, Chen Ding 1,3
- Ganfei Xu 1, Juan Yu 1, Jiacheng Lyu 1
- 1State Key Laboratory of Genetic Engineering, School of Life Sciences, Human Phenome Institute, Department of Pathology, Zhongshan Hospital, Fudan University, Shanghai, 200433, China.
- 2Institute for Developmental and Regenerative Cardiovascular Medicine, MOE-Shanghai Key Laboratory of Children's Environmental Health, Xinhua Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200092, China.
- 3Departments of Cancer Research Institute, Affiliated Cancer Hospital of Xinjiang Medical University, Xinjiang Key Laboratory of Translational Biomedical Engineering, Urumqi, 830000, P. R. China.
- 0State Key Laboratory of Genetic Engineering, School of Life Sciences, Human Phenome Institute, Department of Pathology, Zhongshan Hospital, Fudan University, Shanghai, 200433, China.
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View abstract on PubMed
Summary
This summary is machine-generated.This study deciphers breast ductal carcinoma (BRDC) progression using multi-omics, revealing key molecular events like TP53 mutations driving early stages and immune evasion mechanisms in later phases. AKR1C1 emerges as a therapeutic target.
Area Of Science
- Oncology
- Genomics
- Proteomics
Background
- Understanding breast ductal carcinoma (BRDC) progression is crucial for developing targeted therapies.
- The temporal sequence of biological events in BRDC remains poorly defined.
- Multi-omics approaches offer a powerful tool to unravel complex disease pathways.
Purpose Of The Study
- To elucidate the linear, multi-step progression of BRDC using comprehensive proteogenomic analysis.
- To identify key molecular drivers and therapeutic targets at different stages of BRDC.
- To provide insights into potential therapeutic strategies for BRDC treatment.
Main Methods
- Comprehensive proteogenomic analysis of 224 samples from 168 patients with malignant and benign breast diseases.
- Integration of multi-omics data to map molecular changes during BRDC progression.
- In vitro validation of identified therapeutic targets and inhibitors.
Main Results
- Identified a linear progression model for BRDC.
- TP53 mutation-associated ESR1 overexpression drives transition from ductal hyperplasia (DH) to ductal carcinoma in situ (DCIS).
- 6q21 amplification-associated NR3C1 overexpression facilitates immune evasion in pure DCIS.
- The TIAM1-AR-AKR1C1 axis promotes invasion and migration in DCIS adjacent to invasive cancer (DCIS_adjIDC).
- AKR1C1 identified as a potential therapeutic target, with aspirin and dydrogesterone showing inhibitory effects.
Conclusions
- Proteogenomic analysis provides a detailed map of BRDC progression.
- Specific molecular events and pathways are critical at different stages of BRDC.
- AKR1C1 represents a promising therapeutic target for BRDC, with potential for drug intervention.
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