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Published on: January 18, 2017
DAB2IP loss in luminal a breast cancer leads to NF-κB-associated aggressive oncogenic phenotypes
Angana Mukherjee1,2, Rasha T Kakati3, Sarah Van Alsten4
1UNC Lineberger Comprehensive Cancer, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Abstract:
Despite proven therapy options for estrogen receptor-positive (ER+) breast tumors, a substantial number of patients with ER+ breast cancer exhibit relapse with associated metastasis. Loss of expression of RasGAPs leads to poor outcomes in several cancers, including breast cancer. Mining the The Cancer Genome Atlas (TCGA) breast cancer RNA-Seq dataset revealed that low expression of the RasGAP DAB2IP was associated with a significant decrease in relapse-free survival in patients with Luminal A breast cancer. Immunostaining demonstrated that DAB2IP loss occurred in grade 2 tumors and higher. Consistent with this, genes upregulated in DAB2IP-low Luminal A tumors were shared with more aggressive tumor subtypes and were associated with proliferation, metastasis, and altered ER signaling. Low DAB2IP expression in ER+ breast cancer cells was associated with increased proliferation, enhanced stemness phenotypes, and activation of IKK, the upstream regulator of the transcription factor NF-κB. Integrating cell-based ChIP-Seq with motif analysis and TCGA RNA-Seq data, we identified a set of candidate NF-κB target genes upregulated with loss of DAB2IP linked with several oncogenic phenotypes, including altered RNA processing. This study provides insight into mechanisms associated with aggressiveness and recurrence within a subset of the typically less aggressive Luminal A breast cancer intrinsic subtype.
Insights
Loss of RasGAP DAB2IP expression in estrogen receptor-positive breast cancer is linked to tumor recurrence and metastasis. This finding offers new insights into aggressive Luminal A breast cancer subtypes.
Area of Science:
- Oncology
- Molecular Biology
- Genomics
Background:
- Estrogen receptor-positive (ER+) breast cancer can recur and metastasize despite effective therapies.
- Loss of Ras GTPase-activating protein (RasGAP) expression is linked to poor outcomes in various cancers, including breast cancer.
Purpose of the Study:
- To investigate the role of RasGAP DAB2IP expression in ER+ breast cancer, particularly in Luminal A subtype recurrence.
- To identify molecular mechanisms underlying tumor aggressiveness and metastasis associated with DAB2IP loss.
Main Methods:
- Analysis of The Cancer Genome Atlas (TCGA) breast cancer RNA-Seq dataset.
- Immunohistochemical staining for DAB2IP expression in tumor samples.
- Cell-based experiments assessing proliferation, stemness, and signaling pathways (IKK/NF-κB).
- Chromatin immunoprecipitation sequencing (ChIP-Seq) integrated with motif analysis.
Main Results:
- Low DAB2IP expression in Luminal A breast cancer correlates with decreased relapse-free survival.
- DAB2IP loss is observed in higher-grade tumors (grade 2+).
- Upregulated genes in DAB2IP-low tumors are associated with proliferation, metastasis, and altered ER signaling.
- Reduced DAB2IP expression enhances cell proliferation, stemness, and activates the IKK/NF-κB pathway.
- NF-κB target genes linked to oncogenic phenotypes, including altered RNA processing, are identified.
Conclusions:
- Loss of DAB2IP contributes to aggressiveness and recurrence in a subset of ER+ breast cancers.
- The study elucidates a mechanism involving DAB2IP, NF-κB signaling, and oncogenic phenotypes in breast cancer progression.
- Findings provide insights into therapeutic strategies targeting DAB2IP-deficient ER+ breast tumors.
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