FAM13A polymorphism is associated with a usual interstitial pneumonia pattern in patients with systemic

Elana J Bernstein1, Francesco Boin2, Brett Elicker3

  • 1Division of Rheumatology, Department of Medicine, Columbia University Vagelos College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA.

PubMed
Abstract

Insights

The FAM13A gene, not MUC5B, is linked to a specific lung scarring pattern in systemic sclerosis. This finding offers new insights into the genetic factors influencing systemic sclerosis-associated interstitial lung disease (SSc-ILD) with a usual interstitial pneumonia (UIP) pattern.

Area of Science:

  • Genetics
  • Pulmonology
  • Rheumatology

Background:

  • The MUC5B promoter polymorphism (rs35705950) is associated with idiopathic pulmonary fibrosis (IPF) and rheumatoid arthritis-related interstitial lung disease (RA-ILD), but not systemic sclerosis-associated interstitial lung disease (SSc-ILD).
  • The usual interstitial pneumonia (UIP) pattern on high-resolution chest computed tomography (HRCT) is a key feature in IPF and some connective tissue diseases.

Purpose of the Study:

  • To investigate the association of the MUC5B promoter polymorphism and other IPF susceptibility loci with the uncommon SSc-UIP endotype.
  • To determine if genetic factors predispose SSc-ILD patients to a UIP pattern.

Main Methods:

  • A cross-sectional study of 489 SSc-ILD patients from four US Scleroderma Programs.
  • Genotyping for MUC5B rs35705950 and 12 additional IPF susceptibility loci.
  • HRCT imaging analysis by a blinded thoracic radiologist to classify patients into UIP and non-UIP groups based on American Thoracic Society criteria.

Main Results:

  • The MUC5B SNP rs35705950 was not associated with a definite UIP pattern in SSc-ILD patients.
  • Patients with two copies of the FAM13A minor allele (rs2609255) showed significantly higher odds of a definite UIP pattern compared to other patterns or alternative diagnoses (OR 3.40-3.65).

Conclusions:

  • A novel association between the FAM13A gene and SSc-UIP was identified.
  • The MUC5B promoter polymorphism is not associated with the definite UIP pattern in SSc-ILD, differentiating it from IPF and RA-ILD.

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