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Updated: Jun 10, 2025

Imaging Features of Systemic Sclerosis-Associated Interstitial Lung Disease
Published on: June 16, 2020
FAM13A polymorphism is associated with a usual interstitial pneumonia pattern in patients with systemic
Elana J Bernstein1, Francesco Boin2, Brett Elicker3
1Division of Rheumatology, Department of Medicine, Columbia University Vagelos College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA.
Objectives:
The MUC5B promoter single nucleotide polymorphism (SNP) rs35705950 has been associated with idiopathic pulmonary fibrosis (IPF) and RA-related interstitial lung disease (ILD), but not with SSc-ILD. We hypothesized that the MUC5B promoter polymorphism or other IPF susceptibility loci are associated with an increased risk for the uncommon SSc-usual interstitial pneumonia (UIP) endophenotype, rather than SSc-ILD in general.
Methods:
We performed a cross-sectional study of SSc-ILD patients from four US Scleroderma Programs to investigate the frequency of MUC5B rs35705950 and 12 additional IPF susceptibility loci. SSc-ILD patients were stratified by high resolution chest CT (HRCT) imaging findings into UIP and non-UIP groups. Analysis of HRCTs performed by a thoracic radiologist blinded to participants' characteristics classified each scan as definite UIP, probable UIP, indeterminate or alternative diagnosis, according to American Thoracic Society criteria.
Results:
Four-hundred and eighty-nine SSc-ILD patients were included; 80% were female and 75% were White. Twenty-three (4.7%) patients had a definite UIP pattern. The MUC5B SNP rs35705950 was not associated with a definite UIP pattern in SSc-ILD. In contrast, patients carrying two copies of the IPF risk gene FAM13A minor allele rs2609255 had significantly higher odds of a definite UIP pattern compared with the other patterns (odds ratio 3.40, 95% CI 1.19-9.70), and compared with an alternative diagnosis (odds ratio 3.65, 95% CI 1.25-10.65).
Conclusion:
We demonstrated a novel association between FAM13A and SSc-UIP. Contrary to IPF and RA-ILD, the MUC5B promoter polymorphism was not associated with a definite UIP pattern in SSc-ILD.
Insights
The FAM13A gene, not MUC5B, is linked to a specific lung scarring pattern in systemic sclerosis. This finding offers new insights into the genetic factors influencing systemic sclerosis-associated interstitial lung disease (SSc-ILD) with a usual interstitial pneumonia (UIP) pattern.
Area of Science:
- Genetics
- Pulmonology
- Rheumatology
Background:
- The MUC5B promoter polymorphism (rs35705950) is associated with idiopathic pulmonary fibrosis (IPF) and rheumatoid arthritis-related interstitial lung disease (RA-ILD), but not systemic sclerosis-associated interstitial lung disease (SSc-ILD).
- The usual interstitial pneumonia (UIP) pattern on high-resolution chest computed tomography (HRCT) is a key feature in IPF and some connective tissue diseases.
Purpose of the Study:
- To investigate the association of the MUC5B promoter polymorphism and other IPF susceptibility loci with the uncommon SSc-UIP endotype.
- To determine if genetic factors predispose SSc-ILD patients to a UIP pattern.
Main Methods:
- A cross-sectional study of 489 SSc-ILD patients from four US Scleroderma Programs.
- Genotyping for MUC5B rs35705950 and 12 additional IPF susceptibility loci.
- HRCT imaging analysis by a blinded thoracic radiologist to classify patients into UIP and non-UIP groups based on American Thoracic Society criteria.
Main Results:
- The MUC5B SNP rs35705950 was not associated with a definite UIP pattern in SSc-ILD patients.
- Patients with two copies of the FAM13A minor allele (rs2609255) showed significantly higher odds of a definite UIP pattern compared to other patterns or alternative diagnoses (OR 3.40-3.65).
Conclusions:
- A novel association between the FAM13A gene and SSc-UIP was identified.
- The MUC5B promoter polymorphism is not associated with the definite UIP pattern in SSc-ILD, differentiating it from IPF and RA-ILD.
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