Influence of polymorphisms on the phenotype of TLR1, TLR4 and TLR9 genes and their association with cervical cancer: Bioinformatics prediction analysis and a case-control study

  • 0Laboratory of Molecular Biology and Gene Expression (LABMEG), Federal University of Alagoas (UFAL), Arapiraca, Brazil; Post-Graduation Program in Health Science, Institute of Biological Sciences and Health (ICBS), Federal University of Alagoas (UFAL), Maceió, Brazil.

|

|

Summary

This summary is machine-generated.

Genetic variations in Toll-like receptors (TLRs) are linked to cervical cancer risk. A study found that specific TLR1 gene polymorphisms increase the risk of high-grade intraepithelial lesions and cervical cancer.

Area Of Science

  • Immunogenetics
  • Oncology

Background

  • Toll-like receptors (TLRs) are crucial for innate immunity and their gene polymorphisms may influence cervical cancer development.
  • Previous research suggests a link between TLR gene variations and altered immune responses, potentially contributing to cervical cancer susceptibility.

Purpose Of The Study

  • To investigate the functional impact of polymorphisms in Toll-like receptor 1 (TLR1), TLR4, and TLR9 genes.
  • To assess the association between these TLR gene polymorphisms and the risk of high-grade intraepithelial lesions (HSIL) and cervical cancer in a Brazilian population.

Main Methods

  • Utilized bioinformatics tools (MUpro, ChimeraX, SNP2TFBS, GTEx) to predict the functional effects of polymorphisms.
  • Conducted a case-control study involving 57 cancer/HSIL cases and 67 healthy controls.
  • Genotyped polymorphisms using real-time PCR with TaqMan probes and allelic discrimination.

Main Results

  • Bioinformatics analysis indicated that TLR1 rs4833095 and TLR4 rs4986790 polymorphisms affect protein structure and stability.
  • TLR9 rs187084 polymorphism was predicted to impact THAP1 binding and gene expression.
  • The TLR1 rs4833095 heterozygous genotype (c.743TC) was significantly associated with increased risk for HSIL/cervical cancer.
  • No significant association was found for TLR4 rs4986790 and TLR9 rs187084 SNPs individually.
  • A combined analysis revealed that the CAG allelic combination (rs4833095/rs4986790/rs187084) elevated cervical cancer risk.

Conclusions

  • Polymorphisms in TLR genes can alter gene function and contribute to the development of HSIL and cervical cancer.
  • The TLR1 rs4833095 polymorphism is a potential risk factor for HSIL/cervical cancer in the Brazilian population.
  • Combined effects of specific TLR polymorphisms may synergistically increase cervical cancer risk.

Related Concept Videos

Single Nucleotide Polymorphisms-SNPs 01:05

14.7K

A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...

lncRNA - Long Non-coding RNAs 02:39

8.5K

In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA...

Cancer-Critical Genes II: Tumor Suppressor Genes 01:05

7.3K

Genes usually encode proteins necessary for the proper functioning of a healthy cell. Mutations can often cause changes to the gene expression pattern, thereby altering the phenotype.
When the function of certain critical genes, especially those involved in cell cycle regulation and cell growth signaling cascades, gets disrupted, it upsets the cell cycle progression. Such cells with unchecked cell cycles start proliferating uncontrollably and eventually develop into tumors.
Such genes that act...

Cancer Prevention 02:59

6.1K

Several factors can increase the risk of cancer in an individual. About 50% of cancer cases can be prevented by adopting a healthy lifestyle, regular exercise, eating healthy, and following a modest cancer prevention diet. Epidemiological studies have consistently shown that populations with vegetable and fruit-rich diets have reduced the incidence of cancer. On the other hand, populations who have a diet rich in animal fat, red meat, junk food, or high calories are predisposed to cancer.
Some...