OTUD5 promotes end-joining of deprotected telomeres by promoting ATM-dependent phosphorylation of KAP1S824

Shiu Yeung Lam1, Ruben van der Lugt1, Aurora Cerutti1

  • 1Division of Oncogenomics, The Netherlands Cancer Institute, Amsterdam, The Netherlands.

Nature Communications
|October 17, 2024
PubMed

Insights

The deubiquitinase OTUD5 stabilizes UBR5, promoting DNA damage response signaling and repair at telomeres. Loss of OTUD5 impairs DNA repair, highlighting its role in genome stability.

Area of Science:

  • Cellular biology
  • Molecular genetics
  • Biochemistry

Background:

  • DNA damage response (DDR) signaling involves complex post-translational modifications, including phosphorylation and ubiquitination.
  • The interplay between ubiquitination and phosphorylation in DNA repair at telomeres remains incompletely understood.
  • KAP1 phosphorylation at serine 824 (KAP1S824) is a key marker of DDR at deprotected telomeres.

Purpose of the Study:

  • To identify ubiquitin system factors involved in KAP1S824 phosphorylation at deprotected telomeres.
  • To elucidate the molecular mechanisms by which these factors regulate DDR and DNA repair at telomeres and heterochromatin.

Main Methods:

  • Functional genetic screen to identify ubiquitin system factors.
  • Western blotting to detect KAP1S824 phosphorylation.
  • Assays to measure DNA repair at telomeres and heterochromatin.

Main Results:

  • The deubiquitinase OTUD5 was identified as a promoter of KAP1S824 phosphorylation.
  • OTUD5 stabilizes the ubiquitin ligase UBR5, which is crucial for ATM activation and DDR.
  • Loss of OTUD5 impairs DNA repair at telomeres and heterochromatin, and KAP1 was found to suppress telomere repair.

Conclusions:

  • OTUD5 plays a critical role in relaying DDR signaling to control DNA repair at telomeres and heterochromatin.
  • The study reveals a novel mechanism involving OTUD5, UBR5, and ATM in DDR.
  • KAP1 has an unexpected function in suppressing DNA repair at telomeres.

Related Concept Videos

DNA Damage can Stall the Cell Cycle02:37

DNA Damage can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
9.1K
Telomeres and Telomerase02:41

Telomeres and Telomerase

In eukaryotic DNA replication, a single-stranded DNA fragment remains at the end of a chromosome after the removal of the final primer. This section of DNA cannot be replicated in the same manner as the rest of the strand because there is no 3’ end to which the newly synthesized DNA can attach. This non-replicated fragment results in gradual loss of the chromosomal DNA during each cell duplication. Additionally, it can induce a DNA damage response by enzymes that recognize single-stranded...
23.1K
Restarting Stalled Replication Forks02:37

Restarting Stalled Replication Forks

DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart,...
5.8K
Replication in Eukaryotes01:29

Replication in Eukaryotes

In eukaryotic cells, DNA replication is highly conserved and tightly regulated. Multiple linear chromosomes must be duplicated with high fidelity before cell division, so there are many proteins that fulfill specialized roles in the replication process. Replication occurs in three phases: initiation, elongation, and termination, and ends with two complete sets of chromosomes in the nucleus.
Many Proteins Orchestrate Replication at the Origin
Eukaryotic replication follows many of the same...
13.4K
Anaphase Promoting Complex00:50

Anaphase Promoting Complex

The stepwise destruction of specific proteins is necessary for the progression and completion of the cell cycle. Such proteins are ubiquitinated by ubiquitin ligases and then subsequently destroyed by the proteasome. The SCF (Skp1/Cullin/F-box) and the anaphase-promoting complex (APC) are two important ubiquitin ligases involved in cell cycle progression. While SCF is active throughout the cell cycle, APC gets activated during metaphase to anaphase transition. Cdc20 or Cdh1 binds to APC and...
2.8K
Translesion DNA Polymerases02:10

Translesion DNA Polymerases

Translesion (TLS) polymerases rescue stalled DNA polymerases at sites of damaged bases by replacing the replicative polymerase and installing a nucleotide across the damaged site. Doing so, TLS allows additional time for the cell to repair the damage before resuming regular DNA replication.
TLS polymerases are found in all three domains of life - archaea, bacteria, and eukaryotes. Of the different classes of TLS polymerases, members of the Y family are fitted with specialized structures that...
9.9K