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Hybrid Machine Learning Approach to Zero-Inflated Data Improves Accuracy of Dengue Prediction.
Micanaldo Ernesto Francisco1,2,3, Thaddeus M Carvajal1,4, Kozo Watanabe1
1Center for Marine Environmental Studies (CMES), Ehime University, Matsuyama, Japan.
Plos Neglected Tropical Diseases
|October 21, 2024
Summary
Machine learning models for spatiotemporal dengue forecasting are hindered by zero-inflated data. A novel hybrid approach combining qualitative and quantitative predictions improves accuracy for rare dengue events.
Area of Science:
- Epidemiology
- Machine Learning
- Public Health
Background:
- Spatiotemporal dengue forecasting using machine learning (ML) aids in developing outbreak prevention strategies.
- Zero-inflated data in dengue incidence lowers prediction accuracy, posing a challenge for ML models.
- Understanding the impact of data resolution on prediction accuracy is crucial.
Purpose of the Study:
- To investigate how spatiotemporal data resolutions influence dengue incidence prediction accuracy using ML models.
- To compare the effects of spatiotemporal resolution on quantitative versus qualitative dengue predictions.
- To enhance the accuracy of dengue incidence prediction with zero-inflated data.
Main Methods:
- Compared prediction accuracy across six spatiotemporal resolutions using six ML algorithms.
- Employed data from 2009-2012 for training and 2013 for validation.
- Developed a hybrid approach for quantitative prediction, conditional on qualitative model output for zero-inflated data.
Main Results:
- Higher resolution data exhibited zero-inflation, hindering quantitative ML pattern extraction.
- Qualitative (binary) models mitigated data distribution effects.
- The hybrid approach showed high potential for predicting zero-inflated or rare phenomena like dengue.
Conclusions:
- Spatiotemporal resolution significantly impacts ML-based dengue forecasting accuracy.
- A novel hybrid qualitative-quantitative approach effectively addresses zero-inflated data challenges.
- This method offers an alternative for enhancing dengue prediction accuracy where traditional models fail.

