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Proteogenomic Approaches for Diseasome Studies.
Medhavi Pokhriyall1, Nidhi Shukla2, Tiratha Raj Singh1
1Centre of Excellence in Healthcare Technologies and Informatics (CEHTI), Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology (JUIT), Solan, India.
Methods in Molecular Biology (Clifton, N.J.)
|October 22, 2024
Summary
This review covers proteogenomic methods for analyzing genomic and proteomic data. It highlights sequence-centric integrative modeling for a deeper understanding of gene expression and disease studies.
Area of Science:
- Proteogenomics
- Genomics
- Proteomics
- Bioinformatics
Background:
- Technological advancements in high-throughput next-generation sequencing have significantly increased the understanding of proteomic and genomic data.
- Proteogenomic approaches have historically focused on protein identification and subcellular localization.
- These methods also offer insights into gene expression regulation, signal transduction, and diseasome studies.
Purpose of the Study:
- To review methods and tools for proteogenomic analysis.
- To highlight sequence-centric integrative modeling approaches.
- To discuss the application of proteogenomics in understanding biological processes and diseases.
Main Methods:
- Review of existing literature on proteogenomic methods.
- Discussion of sequence-centric integrative modeling techniques.
- Exploration of computational tools for proteogenomic data analysis.
Main Results:
- Proteogenomics enables a comprehensive understanding of biological systems by integrating multi-omics data.
- Sequence-centric modeling provides a framework for analyzing complex proteogenomic datasets.
- Advancements facilitate deeper insights into gene expression, protein function, and disease mechanisms.
Conclusions:
- Proteogenomic approaches are crucial for advancing biological and medical research.
- Sequence-centric integrative modeling represents a powerful strategy for proteogenomic analysis.
- Further development of methods and tools is essential for maximizing the potential of proteogenomics.
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