Related Experiment Video
Updated: Jun 9, 2025

Curation of Computational Chemical Libraries Demonstrated with Alpha-Amino Acids
Published on: April 13, 2022
Exploration of Chemical Space Through Automated Reasoning
Judith Clymo1, Christopher M Collins2,3, Katie Atkinson1,3
1Department of Computer Science, University of Liverpool, Ashton Building, Ashton Street, Liverpool, L69 3BX, United Kingdom.
Abstract:
The vast size of composition space poses a significant challenge for materials chemistry: exhaustive enumeration of potentially interesting compositions is typically infeasible, hindering assessment of important criteria ranging from novelty and stability to cost and performance. We report a tool, Comgen, for the efficient exploration of composition space, which makes use of logical methods from computer science used for proving theorems. We demonstrate how these techniques, which have not previously been applied to materials discovery, can enable reasoning about scientific domain knowledge provided by human experts. Comgen accepts a variety of user-specified criteria, converts these into an abstract form, and utilises a powerful automated reasoning algorithm to identify compositions that satisfy these user requirements, or prove that the requirements cannot be simultaneously satisfied. In contrast to machine learning techniques, explicitly reasoning about domain knowledge, rather than making inferences from data, ensures that Comgen's outputs are fully interpretable and provably correct. Users interact with Comgen through a high-level Python interface. We illustrate use of the tool with several case studies focused on the search for new ionic conductors. Further, we demonstrate the integration of Comgen into an end-to-end automated workflow to propose and evaluate candidate compositions quantitatively, prior to experimental investigation. This highlights the potential of automated formal reasoning in materials chemistry.
Related Concept Videos
Inductive Reasoning
Inductive reasoning is common in descriptive science. A life scientist makes observations and records them. This data can be qualitative or...
Deductive Reasoning
For example, a researcher can deduce specific predictions...
Reasoning
Inductive reasoning involves deriving generalizations from specific observations. This type of reasoning helps form beliefs about the world. For example,...
Experimental Determination of Chemical Formula
Drug Discovery: Overview
Structure-Activity Relationships and Drug Design
SAR studies the intricate relationship between a drug's chemical structure and biological activity. It focuses on understanding how modifications to a drug's structure can influence...

