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Updated: Jun 9, 2025

Testing Targeted Therapies in Cancer using Structural DNA Alteration Analysis and Patient-Derived Xenografts
Published on: July 25, 2020
Selective targeting of oncogenic hotspot mutations of the HER2 extracellular domain
Injin Bang1, Takamitsu Hattori1,2, Nadia Leloup1
1Laura and Isaac Perlmutter Cancer Center, New York University Langone Health, New York, NY, USA.
Abstract:
Oncogenic mutations in the extracellular domain (ECD) of cell-surface receptors could serve as tumor-specific antigens that are accessible to antibody therapeutics. Such mutations have been identified in receptor tyrosine kinases including HER2. However, it is challenging to selectively target a point mutant, while sparing the wild-type protein. Here we developed antibodies selective to HER2 S310F and S310Y, the two most common oncogenic mutations in the HER2 ECD, via combinatorial library screening and structure-guided design. Cryogenic-electron microscopy structures of the HER2 S310F homodimer and an antibody bound to HER2 S310F revealed that these antibodies recognize the mutations in a manner that mimics the dimerization arm of HER2 and thus inhibit HER2 dimerization. These antibodies as T cell engagers selectively killed a HER2 S310F-driven cancer cell line in vitro, and in vivo as a xenograft. These results validate HER2 ECD mutations as actionable therapeutic targets and offer promising candidates toward clinical development.
Insights
Researchers developed targeted antibodies for specific HER2 mutations (S310F/Y) in cancer. These antibodies inhibit receptor dimerization and selectively kill tumor cells, offering new therapeutic strategies.
Area of Science:
- Oncology
- Immunology
- Structural Biology
Background:
- Oncogenic mutations in cell-surface receptor extracellular domains (ECD) can act as tumor-specific antigens.
- HER2 (Human Epidermal growth factor Receptor 2) is a receptor tyrosine kinase with known oncogenic mutations in its ECD.
- Developing therapeutics that selectively target mutated proteins while sparing wild-type is a significant challenge.
Purpose of the Study:
- To develop novel antibodies that selectively target common oncogenic mutations (S310F and S310Y) in the HER2 ECD.
- To investigate the mechanism of antibody binding and its effect on HER2 dimerization and function.
- To evaluate the therapeutic potential of these antibodies in preclinical cancer models.
Main Methods:
- Combinatorial library screening and structure-guided design were employed to generate selective antibodies.
- Cryogenic-electron microscopy (cryo-EM) was used to determine the structures of HER2 mutants and antibody-bound complexes.
- In vitro and in vivo assays were performed to assess the efficacy of antibody-mediated cancer cell killing and tumor growth inhibition.
Main Results:
- Antibodies selective for HER2 S310F and S310Y mutations were successfully developed.
- Structural analysis revealed antibodies mimic HER2 dimerization arms, inhibiting receptor dimerization.
- Antibody-T cell engagers demonstrated selective killing of HER2 S310F-driven cancer cells in vitro and reduced tumor growth in vivo.
Conclusions:
- HER2 ECD mutations represent actionable targets for antibody-based therapeutics.
- The developed antibodies show promise for selective targeting of HER2-mutated cancers.
- These findings support further clinical development of these novel antibody therapeutics.
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