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Surface Enhanced Raman Spectroscopy Detection of Biomolecules Using EBL Fabricated Nanostructured Substrates
Published on: March 20, 2015
Simultaneous Recognition and Detection of Adenosine Phosphates by Machine Learning Analysis for Surface-Enhanced
Ryosuke Nishitsuji1, Tomoharu Nakashima2, Hideaki Hisamoto3
1Department of Information Networking, Graduate School of Information Science and Technology, Osaka University, 2-8 Yamadaoka, Suita 565-0871, Osaka, Japan.
This study introduces a new method using surface-enhanced Raman scattering (SERS) and machine learning to detect adenosine phosphates (AMP, ADP, ATP). The multilayer perceptron model achieved high accuracy, enabling precise analysis from limited spectral data.
Area of Science:
- Biochemistry
- Analytical Chemistry
- Spectroscopy
Background:
- Adenosine phosphates (AMP, ADP, ATP) are crucial for biological energy storage and signal transduction.
- Simultaneous detection of adenosine phosphates is vital for understanding cellular energy dynamics.
- Existing methods face challenges due to the structural similarities of adenosine phosphates.
Purpose of the Study:
- To develop a novel measurement system for simultaneous recognition and detection of adenosine phosphates.
- To overcome the limitations of current techniques requiring extensive training data.
- To enhance the accuracy of adenosine phosphate detection using limited spectral data.
Main Methods:
- Utilized surface-enhanced Raman scattering (SERS) with fabricated gold nanostructures for spectral measurements.
- Employed feature selection and data augmentation for preprocessing limited adenosine phosphate spectral data.
- Trained and compared various machine learning models, including multilayer perceptron.
Main Results:
- A multilayer perceptron model was successfully trained on augmented spectral data.
- The model achieved a high accuracy of 0.914 in detecting AMP, ADP, and ATP.
- Demonstrated effective recognition and detection of adenosine phosphates from limited SERS data.
Conclusions:
- Established a novel measurement system for accurate adenosine phosphate detection.
- Showcased the potential of combining SERS with machine learning for complex molecular analysis.
- Overcame the challenge of limited training data in spectroscopic analysis.
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