Biomarker identification and risk assessment of cardiovascular disease based on untargeted metabolomics and machine

Xu Zhou1, Xinhao Sun1, Hongwei Zhao1

  • 1School of Public Health/Key Laboratory of Endemic and Ethnic Diseases, Ministry of Education & Key Laboratory of Medical Molecular Biology of Guizhou Province, Guizhou Medical University, No. 6 Ankang Avenue, Gui'an New District, Guiyang, Guizhou Province, 561113, China.

Scientific Reports
|October 29, 2024
PubMed

Insights

This study identified key metabolites and clinical factors to predict cardiovascular disease (CVD) risk. A machine learning model using these biomarkers achieved 91% accuracy, offering a promising tool for early CVD detection.

Area of Science:

  • Biochemistry
  • Metabolomics
  • Machine Learning

Background:

  • Cardiovascular disease (CVD) remains a primary cause of death and disability globally.
  • Despite advancements, effective diagnosis and prevention of CVD remain significant challenges.
  • Identifying novel biomarkers is crucial for improving CVD risk assessment.

Purpose of the Study:

  • To discover novel CVD-associated biomarkers.
  • To develop a machine learning model for accurate CVD risk assessment.

Main Methods:

  • Untargeted metabolomic analysis using ultra-high performance liquid chromatography-tandem mass spectrometry (UHPLC-MS/MS).
  • Analysis of routine clinical biochemistry tests.
  • Development and validation of a machine learning model.

Main Results:

  • Identified 164 CVD-associated metabolites, particularly in glycerophospholipid metabolism and unsaturated fatty acid biosynthesis.
  • A machine learning model integrating metabolites (e.g., palmitic amide, oleic acid, phosphatidylcholine, linoleic acid) and clinical factors (age, direct bilirubin, inorganic phosphate) achieved a high accuracy of 0.91 for CVD risk assessment.
  • Disruptions in biological membrane and energy metabolism are linked to vascular damage in CVD.

Conclusions:

  • Metabolic disorders, especially in membrane and energy pathways, are significantly associated with CVD risk.
  • The developed machine learning model shows promise for efficient CVD risk assessment and diagnosis.
  • Integrated biomarker panels offer a novel approach to enhance early detection and management of cardiovascular disease.