N6-Methyladenosine modification activates the serine synthesis pathway to mediate therapeutic resistance in liver

For-Fan Chan1, Kenneth Kin-Leung Kwan2, Do-Hyun Seoung2

  • 1State Key Laboratory of Liver Research and Department of Pathology, School of Clinical Medicine, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong.

Insights

Targeting m6A modification of the serine synthesis pathway (SSP) inhibits hepatocellular carcinoma (HCC) growth and overcomes drug resistance. This study reveals m6A regulation of SSP enzymes, offering a potential therapeutic strategy for HCC.

Area of Science:

  • Cancer Biology
  • Epigenetics
  • Metabolic Pathways

Background:

  • Metabolic adaptation is crucial for cancer progression and treatment resistance.
  • The role of N6-methyladenosine (m6A) modification in hepatocellular carcinoma (HCC) remains incompletely understood.
  • Serine synthesis pathway (SSP) dysregulation contributes to cancer development.

Purpose of the Study:

  • To investigate the role of m6A-mediated regulation of the SSP in HCC.
  • To explore the potential of targeting m6A modification for HCC therapy and overcoming resistance.

Main Methods:

  • Treatment of HCC cell lines and mice with the m6A inhibitor STM2457.
  • GLORI-seq to map the m6A landscape in HCC.
  • Analysis of m6A modification, mRNA/protein expression of SSP enzymes (PHGDH, PSAT1, PSPH), and oxidative stress markers.

Main Results:

  • STM2457 inhibited HCC cell growth and spontaneous tumor formation in mice.
  • METTL3-mediated m6A modification of SSP enzymes (PHGDH, PSAT1, PSPH) was identified, stabilized by IGF2BP3.
  • Sorafenib-resistant HCC cells showed increased m6A modification in SSP genes, enhancing protein and antioxidant production; STM2457 reversed this, sensitizing cells to therapy.

Conclusions:

  • m6A modification of the serine synthesis pathway is a key driver of HCC development and therapeutic resistance.
  • Targeting m6A modification, particularly with inhibitors like STM2457, represents a promising therapeutic strategy for HCC.
  • This approach can overcome resistance to existing therapies by attenuating the SSP and inducing oxidative stress.

Related Concept Videos

Biosynthesis of Nucleic Acids01:28

Biosynthesis of Nucleic Acids

Nucleic acid biosynthesis is a fundamental biochemical process that produces the purine and pyrimidine nucleotides essential for DNA and RNA synthesis. This pathway maintains a balanced nucleotide pool, preventing imbalances that could jeopardize genetic integrity and cellular function. Given the crucial role of nucleotides, their synthesis is tightly regulated to ensure proper cellular homeostasis.Purine BiosynthesisThe biosynthesis of purine nucleotides begins with ribose-5-phosphate, a...
9
Treatment Resistant Cancers02:56

Treatment Resistant Cancers

Cancer is the second leading cause of death in the United States. A cancer cell is genetically unstable and hence can mutate faster. They can also modify their microenvironment and escape immune surveillance. The difficulties in treating cancer are further compounded by the emergence of rapid resistance to anticancer drugs. The most common ways to attain resistance in cancer cells include alteration in drug transport and metabolism, modification of drug target, elevated DNA damage response, or...
3.3K
RNA Editing02:23

RNA Editing

RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
8.9K
Epigenetic Regulation01:37

Epigenetic Regulation

Epigenetic changes alter the physical structure of the DNA without changing the genetic sequence and often regulate whether genes are turned on or off. This regulation ensures that each cell produces only proteins necessary for its function. For example, proteins that promote bone growth are not produced in muscle cells. Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.
X-chromosome...
3.0K
mTOR Signaling and Cancer Progression03:03

mTOR Signaling and Cancer Progression

The mammalian target of rapamycin or mTOR protein was discovered in 1994 due to its direct interaction with rapamycin. The protein gets its name from a yeast homolog called TOR. The mTOR protein complex in mammalian cells plays a major role in balancing anabolic processes such as the synthesis of proteins, lipids, and nucleotides and catabolic processes, such as autophagy in response to environmental cues, such as availability of nutrients and growth factors.
The mTOR pathway or the...
3.7K
Adaptive Mechanisms in Cancer Cells02:53

Adaptive Mechanisms in Cancer Cells

Cancer cells accumulate genetic changes at an abnormally rapid rate due to the defects in the DNA repair mechanisms. From an evolutionary perspective, such genetic instability is advantageous for cancer development. Mutant cell lines accumulate a series of beneficial mutations that contribute to their progression into cancer.
Some of the advantages that cancer cells have on normal cells include - enhanced ability to divide without terminally differentiating, induce new blood vessel formation,...
5.7K