The first molecular characterization and phylogenetic analysis of bovine papular stomatitis virus in Iran

Bovine papular stomatitis (BPS) generally is a mild viral disease caused by the Bovine papular stomatitis virus (BPSV) belonging to the genus Parapoxvirus (PPV). This study aimed to perform the first molecular characterization and phylogenetic analysis of BPSV in beef calves in Iran. Clinical examinations were carried out on four beef cattle herds in West Azerbaijan province, which had experienced outbreaks of papular lesions. Fifty swab samples were collected from the papular lesions on the muzzle, lips, and oral cavity of affected calves, and after viral DNA extraction, they were subjected to polymerase chain reaction (PCR). The results of PCR confirmed the presence of BPSV in all calves with clinical symptoms. The partial B2L gene was sequenced based on nucleotides, and phylogenetic analysis was performed using MEGA 11.0.13. The analysis revealed that BPSV isolates from beef calves in Iran formed two clades. Clade 1 exhibited similarities to the isolates from Finland, Japan, and Georgia, while Clade 2 was similar to the Zambian isolates. These findings indicate the presence of genetic diversity and potential variability within the virus population. Further studies with larger sample sizes and diverse geographic regions will increase the resolution of the phylogenetic tree and contribute to a comprehensive understanding of how BPSV circulates in the country.