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Fungal Group Zygomycota01:29

Fungal Group Zygomycota

Zygomycota, previously classified as a distinct fungal group, are primarily terrestrial, saprophytic molds that play a crucial role as decomposers. Recent phylogenetic studies have revealed that these fungi are now divided into two major clades — Mucoromycota, which includes many symbiotic species, and Zoopagomycota, which primarily consists of parasitic and pathogenic fungi. These groups exhibit distinct ecological roles and reproductive strategies while sharing key structural and...

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Exploring Bioactive Fungal RiPPs: Advances, Challenges, and Future Prospects.

Qiuyue Nie1,2, Chunxiao Sun1,2, Shuai Liu1,2

  • 1Department of Chemical and Biomolecular Engineering, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States.

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Fungal ribosomally synthesized and post-translationally modified peptides (RiPPs) are potent natural products. This review explores their biosynthesis and genome-guided discovery, highlighting potential for new therapeutics.

Keywords:
bioactivitybioinformaticsbiosynthesisfungal RiPPsprecursor peptides

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Area of Science:

  • Natural Product Chemistry
  • Mycology
  • Bioinformatics

Background:

  • Fungal ribosomally synthesized and post-translationally modified peptides (RiPPs) are a crucial class of natural products with diverse biological activities, including anticancer and immunosuppressant properties.
  • These compounds play significant roles in fungal chemical ecology and possess considerable therapeutic potential.
  • Despite their importance, the discovery of fungal RiPPs has been historically limited, with only a few known classes identified.

Purpose of the Study:

  • To review recent advancements in understanding fungal RiPP biosynthesis.
  • To highlight genome-guided strategies for discovering novel fungal RiPPs.
  • To propose integrated approaches for accelerating the identification of new bioactive fungal RiPPs.

Main Methods:

  • Review of current literature on fungal RiPP biosynthesis.
  • Analysis of bioinformatics tools and genome-mining strategies for RiPP discovery.
  • Discussion of gene-editing technologies in conjunction with biosynthetic knowledge.

Main Results:

  • Recent bioinformatics advancements reveal vast untapped potential for fungal RiPP production.
  • Established knowledge of fungal RiPP biosynthetic pathways is crucial for discovery.
  • Integration of bioinformatics, gene editing, and biosynthetic pathway knowledge is key.

Conclusions:

  • Combining knowledge of fungal RiPP biosynthetic pathways with advanced gene-editing technologies and bioinformatic tools will significantly accelerate the discovery of novel bioactive fungal RiPPs.
  • This integrated approach promises to unlock the therapeutic potential of these complex natural products.
  • Further research in this area is essential for expanding the repertoire of known fungal RiPPs and their applications.