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Identifying Multiomic Signatures of X-Linked Retinoschisis-Derived Retinal Organoids and Mice Harboring

Yueh Chien1,2, You-Ren Wu1,2, Chih-Ying Chen1,2

  • 1Department of Medical Research, Taipei Veterans General Hospital, Taipei, 11217, Taiwan.

Advanced Science (Weinheim, Baden-Wurttemberg, Germany)
|November 6, 2024
PubMed
Summary

Multiomics analysis reveals conserved ER stress pathways in X-linked retinoschisis (XLRS). Targeting these pathways enhances gene therapy efficacy, improving retinal structure and function in XLRS models.

Keywords:
X‐link retinoschisis (XLRS)chronic ER stress‐associated apoptosiseIF2α signalinggenetically engineered miceretinoschisin 1 (RS1)single‐cell RNA‐sequencingspatiotemporal transcriptomics

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Area of Science:

  • Genomics and Molecular Biology
  • Ophthalmology
  • Cell Biology

Background:

  • X-linked retinoschisis (XLRS) is an inherited retinal disorder causing severe vision loss.
  • Understanding XLRS pathomechanisms requires dissecting complex transcriptional networks and cell interactions.
  • Multiomics approaches, integrating single-cell RNA sequencing (scRNA-seq) and spatiotemporal transcriptomics (ST), offer powerful tools for this investigation.

Purpose of the Study:

  • To elucidate XLRS-specific transcriptomic signatures using a multimodal approach.
  • To identify conserved disease pathways and validate molecular mechanisms in XLRS models.
  • To evaluate therapeutic strategies targeting identified pathways for XLRS.

Main Methods:

  • High-throughput scRNA-seq and ST were employed on genetically engineered mice and patient-derived retinal organoids.
  • Multiomics transcriptomic analysis identified key signaling pathways involved in XLRS.
  • Western blots, proteomics, and AAV-mediated gene delivery were used for validation and therapeutic assessment.

Main Results:

  • Chronic endoplasmic reticulum (ER) stress/eukaryotic initiation factor 2 (eIF2) signaling, mTOR, eIF4, and p70S6K pathways were identified as conserved in XLRS models.
  • Validation confirmed unfolded protein responses, chronic eIF2α signaling, and ER stress-induced apoptosis.
  • Therapeutic targeting of ER stress/eIF2α synergistically enhanced RS1 gene therapy, improving retinal integrity and function.

Conclusions:

  • The multiomics approach successfully identified conserved disease pathways in XLRS.
  • Targeting ER stress/eIF2α signaling presents a promising therapeutic strategy for XLRS.
  • This study provides a foundation for developing novel treatments for XLRS and other inherited retinal diseases.