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Updated: Jun 8, 2025

Nanomechanics of Drug-target Interactions and Antibacterial Resistance Detection
Published on: October 25, 2013
Single Amine or Guanidine Modification on Norvancomycin and Vancomycin to Overcome Multidrug-Resistance through
Xiaolei Bian1, Zhifu Chen2, Fang Li1,3
1Shandong Laboratory of Yantai Drug Discovery, Bohai Rim Advanced Research Institute for Drug Discovery, Yantai, Shandong 264117, China.
Abstract:
Vancomycin and norvancomycin have diminished antibacterial efficacy due to acquired or intrinsic resistance from mutations in the terminal dipeptide of lipid II in Gram-positive bacteria or failure to penetrate into the periplasm in Gram-negative bacteria. Herein, we rationally designed and synthesized a series of vancomycin analogues bearing single amine or guanidine functionality, altering various linkers and modification sites, to combat the resistance. Extensive antibacterial screening was performed to delineate a comprehensive SAR. Many derivatives revitalized the activity in vitro, exhibiting a 4-128-fold or 2-16-fold enhancement against the acquired or intrinsic resistance with lower toxicity. Significantly, the optimal compound 4g demonstrated greater pharmacokinetic and pharmacodynamic profiles. Further studies uncovered additional independent and synergistic mechanisms for 4g, including the enhanced membrane activity and augmented inhibition of peptidoglycan biosynthesis via increased lipid II binding, highlighting its potential as a future lead candidate to replenish the glycopeptide antibiotic arsenal.
Insights
New vancomycin analogues combat antibiotic resistance by restoring antibacterial efficacy against resistant bacteria. Compound 4g shows enhanced activity and improved pharmacokinetic profiles, offering a promising lead for future glycopeptide antibiotics.
Area of Science:
- Medicinal Chemistry
- Microbiology
- Pharmacology
Background:
- Vancomycin and norvancomycin efficacy is reduced by bacterial resistance mechanisms.
- Resistance arises from target mutations in Gram-positive bacteria or poor penetration in Gram-negative bacteria.
Purpose of the Study:
- To design and synthesize novel vancomycin analogues to overcome existing resistance.
- To evaluate the antibacterial activity, toxicity, and mechanisms of action of these new compounds.
Main Methods:
- Rational design and synthesis of vancomycin analogues with amine or guanidine functionalities.
- Comprehensive antibacterial screening to establish structure-activity relationships (SAR).
- Pharmacokinetic and pharmacodynamic profiling of lead candidates.
Main Results:
- Many derivatives demonstrated restored in vitro activity against resistant strains (4-128-fold enhancement).
- Reduced toxicity was observed in effective derivatives compared to parent compounds.
- Compound 4g exhibited superior pharmacokinetic and pharmacodynamic properties.
Conclusions:
- Novel vancomycin analogues effectively combat antibiotic resistance in vitro.
- Compound 4g shows potential as a lead candidate for new glycopeptide antibiotics.
- Mechanisms include enhanced membrane activity and improved inhibition of peptidoglycan biosynthesis.
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