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Updated: Jun 7, 2025

Colorectal Cancer Cell Surface Protein Profiling Using an Antibody Microarray and Fluorescence Multiplexing
Published on: September 25, 2011
Knockdown Proteomics Reveals USP7 as a Regulator of Cell-Cell Adhesion in Colorectal Cancer via AJUBA
Ahood Al-Eidan1, Ben Draper2, Siyuan Wang2
1School of Biological Sciences, Faculty of Environmental and Life Sciences, University of Southampton, Southampton, United Kingdom; Department of Biology, College of Sciences, Imam Abdulrahman Bin Faisal University, Dammam, Saudi Arabia.
Abstract:
Ubiquitin-specific protease 7 (USP7) is implicated in many cancers including colorectal cancer in which it regulates cellular pathways such as Wnt signaling and the P53-MDM2 pathway. With the discovery of small-molecule inhibitors, USP7 has also become a promising target for cancer therapy and therefore systematically identifying USP7 deubiquitinase interaction partners and substrates has become an important goal. In this study, we selected a colorectal cancer cell model that is highly dependent on USP7 and in which USP7 knockdown significantly inhibited colorectal cancer cell viability, colony formation, and cell-cell adhesion. We then used inducible knockdown of USP7 followed by LC-MS/MS to quantify USP7-dependent proteins. We identified the Ajuba LIM domain protein as an interacting partner of USP7 through co-IP, its substantially reduced protein levels in response to USP7 knockdown, and its sensitivity to the specific USP7 inhibitor FT671. The Ajuba protein has been shown to have oncogenic functions in colorectal and other tumors, including regulation of cell-cell adhesion. We show that both knockdown of USP7 or Ajuba results in a substantial reduction of cell-cell adhesion, with concomitant effects on other proteins associated with adherens junctions. Our findings underlie the role of USP7 in colorectal cancer through its protein interaction networks and show that the Ajuba protein is a component of USP7 protein networks present in colorectal cancer.
Insights
Ubiquitin-specific protease 7 (USP7) is crucial in colorectal cancer, regulating key pathways. This study identifies Ajuba protein as a USP7 partner, revealing its role in cell adhesion and potential as a therapeutic target.
Area of Science:
- Oncology
- Molecular Biology
- Biochemistry
Background:
- Ubiquitin-specific protease 7 (USP7) plays a role in various cancers, including colorectal cancer, by regulating Wnt signaling and the P53-MDM2 pathway.
- USP7 is a promising therapeutic target for cancer due to the availability of small-molecule inhibitors.
- Identifying USP7 interaction partners and substrates is essential for understanding its role in cancer.
Purpose of the Study:
- To identify USP7-dependent proteins in a colorectal cancer cell model.
- To investigate the interaction between USP7 and the Ajuba LIM domain protein.
- To elucidate the role of the USP7-Ajuba interaction in colorectal cancer cell adhesion.
Main Methods:
- Inducible knockdown of USP7 in a colorectal cancer cell model.
- Liquid chromatography-tandem mass spectrometry (LC-MS/MS) for quantitative proteomics.
- Co-immunoprecipitation (Co-IP) to identify protein interactions.
Main Results:
- USP7 knockdown significantly inhibited colorectal cancer cell viability, colony formation, and cell-cell adhesion.
- The Ajuba LIM domain protein was identified as a USP7 interacting partner.
- Knockdown of USP7 or Ajuba reduced cell-cell adhesion and affected adherens junction proteins.
Conclusions:
- USP7 plays a significant role in colorectal cancer progression through its protein interaction networks.
- The Ajuba protein is a component of USP7 protein networks in colorectal cancer and contributes to cell-cell adhesion.
- Targeting the USP7-Ajuba interaction may offer a therapeutic strategy for colorectal cancer.
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