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Spectral Graph Sample Weighting for Interpretable Sub-cohort Analysis in Predictive Models for Neuroimaging
Magdalini Paschali1, Yu Hang Jiang2, Spencer Siegel2
1Department of Radiology, Stanford University, Stanford, CA, USA.
This study introduces a novel machine learning approach to account for patient heterogeneity in brain disorder prediction. The method improves model accuracy and interpretability by assigning factor-dependent weights to training samples.
Area of Science:
- Neuroscience
- Machine Learning
- Medical Informatics
Background:
- Brain disorders exhibit significant heterogeneity in mechanisms, development, and severity.
- This heterogeneity, influenced by factors like sex and genetics, impacts the predictive accuracy of machine learning models.
- Existing methods struggle to effectively model and address this patient variability.
Purpose of the Study:
- To develop a novel sample weighting scheme for machine learning models to address heterogeneity in brain disorder prediction.
- To improve the interpretability and predictive power of models by accounting for subject-specific factors.
- To identify sub-cohorts with varying degrees of predictability within patient populations.
Main Methods:
- Proposed a method to model subject weights as a linear combination of spectral population graph eigenbases.
- Captured similarity of demographic and disease-related factors across subjects using a graph.
- Applied the weighting scheme to predict heavy alcohol drinking initiation and differentiate Dementia from Mild Cognitive Impairment.
Main Results:
- The proposed sample weighting scheme improved interpretability compared to existing methods.
- Successfully highlighted sub-cohorts with distinct characteristics and varying model accuracy.
- Demonstrated effectiveness in predicting alcohol drinking initiation and detecting cognitive impairment.
Conclusions:
- The developed sample weighting strategy effectively models patient heterogeneity in machine learning for brain disorders.
- This approach enhances model interpretability and identifies specific patient subgroups with differential predictability.
- The method shows promise for improving diagnostic and prognostic accuracy in neurological and psychiatric conditions.
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