Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Gram-negative Bacterial Protein Secretion Systems01:17

Gram-negative Bacterial Protein Secretion Systems

1
Gram-negative bacteria utilize sophisticated protein secretion systems to transport proteins across their double-membrane envelope into the extracellular environment or host cells. Based on their mechanism of action, these systems are classified into one-step and two-step pathways.One-Step Secretion Systems (Types I, III, IV, and VI)One-step secretion systems bypass the periplasm entirely, forming a continuous channel that spans both the inner and outer membranes:Type I Secretion System (T1SS):...
1
Formation of Lipopolysaccharides01:19

Formation of Lipopolysaccharides

1
Lipopolysaccharides (LPS) are crucial components of the outer membrane of Gram-negative bacteria, serving both structural and functional roles. It contributes to membrane stability and protects bacteria from host immune responses. LPS is composed of three major regions—lipid A, a core oligosaccharide, and an O antigen. The biosynthesis and assembly of LPS involve a highly coordinated set of enzymatic reactions and transport mechanisms. Additionally, LPS is recognized as an endotoxin,...
1
Antimicrobial Proteins01:23

Antimicrobial Proteins

934
Antimicrobial proteins are important components of the immune system. They aid the body in combating pathogens by either killing them directly or hindering their replication processes. Four main types of antimicrobial substances are interferons, the complement system, iron-binding proteins, and antimicrobial proteins.
Interferons
Interferons (IFNs) are proteins produced by lymphocytes, macrophages, and fibroblasts infected with viruses. While IFNs cannot prevent viruses from entering and...
934
Bacterial Translocation and Protein Secretion01:26

Bacterial Translocation and Protein Secretion

2
Bacterial protein secretion involves translocation systems to ensure proteins reach their designated locations, including the plasma membrane, periplasm, outer membrane, or the external environment. These translocation systems are vital for bacterial physiology, supporting processes like membrane assembly, enzymatic activity in the periplasm, and interactions with the external environment. The division of labor between Sec and Tat pathways ensures efficiency in handling proteins with diverse...
2
Bacterial Cell Wall01:22

Bacterial Cell Wall

2
The bacterial cell wall is an essential structural component that encases the plasma membrane, preserving cellular integrity, determining shape, and protecting against osmotic stress. This rigid yet flexible structure primarily comprises peptidoglycan, a polymer that forms a mesh-like matrix conferring mechanical strength and flexibility.Peptidoglycan Composition and StructurePeptidoglycan, the core of the bacterial cell wall, comprises alternating units of N-acetylglucosamine (NAG) and...
2
Protein Complexes with Interchangeable Parts01:57

Protein Complexes with Interchangeable Parts

2.5K
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
2.5K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

UV-DDB as a Dynamic Regulator Linking Base Excision and Nucleotide Excision Repair via AAG Interaction.

International journal of molecular sciences·2026
Same author

Exploiting siderophores and related proteins for antimicrobial strategies in Staphylococcus aureus: A review.

Bioorganic chemistry·2026
Same author

Scalable Nanoemulsion Formation of Lipophilic Active Ingredients via Low-Energy Phase Inversion.

Polymers·2026
Same author

Effectiveness of Using the AOPT-LTL Technique for the Treatment of Melasma: A Clinical Study.

Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI)·2026
Same author

Next-Generation Respiratory Models: Bridging the Gap Between Biology and Bioengineering.

Advanced healthcare materials·2026
Same author

Mineralization of calcium carbonate by cave bacteria.

Bioresource technology·2026

Related Experiment Video

Updated: Jun 7, 2025

Analysis of Yersinia enterocolitica Effector Translocation into Host Cells Using Beta-lactamase Effector Fusions
12:23

Analysis of Yersinia enterocolitica Effector Translocation into Host Cells Using Beta-lactamase Effector Fusions

Published on: October 13, 2015

8.5K

Structural and Functional Insight Into YefM-YoeB Complex of Toxin-Antitoxin System From Streptococcus pneumoniae.

Do-Hee Kim1, Yong-Chan Lee2, Chenglong Jin2,3

  • 1Research Institute of Pharmaceutical Sciences, College of Pharmacy, Sookmyung Women's University, Seoul, Republic of Korea.

Journal of Cellular Biochemistry
|November 12, 2024
PubMed
Summary
This summary is machine-generated.

The YefM-YoeB toxin-antitoxin system in Streptococcus pneumoniae was structurally and functionally characterized. Understanding this system offers potential for developing new antibiotics against drug-resistant bacterial infections.

Keywords:
Streptococcus pneumoniaeX‐ray crystallographyYefM–YoeBantibioticstoxin–antitoxin system

More Related Videos

Producing Gene Deletions in Escherichia coli by P1 Transduction with Excisable Antibiotic Resistance Cassettes
08:13

Producing Gene Deletions in Escherichia coli by P1 Transduction with Excisable Antibiotic Resistance Cassettes

Published on: September 1, 2018

17.1K
Quantifying Yersinia pseudotuberculosis Type III Secretion System Activity Following Iron Starvation and Anaerobic Growth
08:36

Quantifying Yersinia pseudotuberculosis Type III Secretion System Activity Following Iron Starvation and Anaerobic Growth

Published on: May 31, 2024

417

Related Experiment Videos

Last Updated: Jun 7, 2025

Analysis of Yersinia enterocolitica Effector Translocation into Host Cells Using Beta-lactamase Effector Fusions
12:23

Analysis of Yersinia enterocolitica Effector Translocation into Host Cells Using Beta-lactamase Effector Fusions

Published on: October 13, 2015

8.5K
Producing Gene Deletions in Escherichia coli by P1 Transduction with Excisable Antibiotic Resistance Cassettes
08:13

Producing Gene Deletions in Escherichia coli by P1 Transduction with Excisable Antibiotic Resistance Cassettes

Published on: September 1, 2018

17.1K
Quantifying Yersinia pseudotuberculosis Type III Secretion System Activity Following Iron Starvation and Anaerobic Growth
08:36

Quantifying Yersinia pseudotuberculosis Type III Secretion System Activity Following Iron Starvation and Anaerobic Growth

Published on: May 31, 2024

417

Area of Science:

  • Microbiology
  • Structural Biology
  • Molecular Biology

Background:

  • Streptococcus pneumoniae causes severe diseases like pneumonia and meningitis.
  • Antibiotic resistance necessitates novel therapeutic mechanisms.
  • Toxin-antitoxin (TA) systems, like YefM-YoeB, are potential antimicrobial targets.

Purpose of the Study:

  • To elucidate the structural basis of the YefM-YoeB TA system in S. pneumoniae.
  • To investigate the functional activity of the YoeB toxin.
  • To understand the binding interactions for potential drug development.

Main Methods:

  • X-ray crystallography to determine the YefM-YoeB complex structure.
  • In vitro ribonuclease activity assays for YoeB toxin.
  • Analytical ultracentrifugation to determine the oligomeric state in solution.

Main Results:

  • The crystal structure of the S. pneumoniae YefM-YoeB complex was determined.
  • The ribonuclease activity of the YoeB toxin was confirmed.
  • The oligomeric state and a proposed DNA-binding mode of the complex were investigated.

Conclusions:

  • Structural and functional data provide insights into TA system mechanisms.
  • The YefM-YoeB system is a promising target for novel antibiotic development.
  • Targeting this system could combat antibiotic-resistant S. pneumoniae infections.