Related Experiment Video
Updated: Jun 7, 2025

Voltage-Dependent Potassium Current Recording on H9c2 Cardiomyocytes via the Whole-Cell Patch-Clamp Technique
Published on: November 11, 2022
Isoleucine gate blocks K+ conduction in C-type inactivation
Werner Treptow1,2, Yichen Liu3, Carlos A Z Bassetto2
1Laboratório de Biologia Teórica e Computacional (LBTC), Universidade de Brasília, Brasilia, Brazil.
C-type inactivation in voltage-gated potassium (Kv) channels involves a hydrophobic gate at I398, not just the dilated selectivity filter. This gate is crucial for blocking ion conduction and a target for drug development.
Area of Science:
- Molecular and Cellular Biology
- Biophysics
- Structural Biology
Background:
- Voltage-gated potassium (Kv) channels regulate cellular excitability.
- C-type inactivation is a key mechanism controlling Kv channel function.
- Previous structural studies proposed a dilated selectivity filter as the non-conductive state.
Purpose of the Study:
- To investigate the structural basis of C-type inactivation in Kv channels.
- To reconcile structural findings with functional data on Kv channel inactivation.
- To identify key molecular determinants of ion conduction block.
Main Methods:
- Molecular dynamics simulations of Kv channel mutants.
- Electrophysiological recordings to measure ionic currents.
- Structural analysis of channel conformations.
Main Results:
- The dilated selectivity filter in kv1.2-kv2.1-3m is conductive, not fully non-conductive.
- A hydrophobic gate formed by isoleucine 398 (I398) residues is essential for blocking ion conduction.
- Mutating I398 to asparagine restores ion permeation but retains C-type inactivation.
- This I398 gate is a target for quaternary ammonium blockers.
Conclusions:
- C-type inactivation requires a conformational change involving the I398 hydrophobic gate, located below the selectivity filter.
- The I398 gate is a critical component of the Kv channel inactivation machinery.
- This finding opens avenues for developing drugs targeting Kv channel gating states.
Related Concept Videos
Non-gated Ion Channels
Compared to the gated ion channels, the non-gated channels, also known as leakage or passive channels, have no gating mechanism....
Antiarrhythmic Drugs: Class III Agents as Potassium Channel Blockers
Ligand-Gated Ion Channel Receptor: Gating Mechanism
Voltage-gated Ion Channels
Generally, all voltage-gated ion channels have a 'voltage-sensing domain' that spans the lipid bilayer. The charged residues in the sensor move in response to the membrane potential changes that open the channel allowing ions movement. There are several...
Antiarrhythmic Drugs: Class I Agents as Sodium Channel Blockers
Class 1A Antiarrhythmic Drugs: These drugs work by moderately blocking sodium channels,...
Ligand-gated Ion Channels
Three Subfamilies of Ligand-gated Ion Channels
Ligand-gated ion channels fall into three subfamilies. The 'Cys-loop' includes the nicotinic acetylcholine receptors, γ-aminobutyric acid (GABA), glycine, and 5-hydroxytryptamine receptors. The second one is the 'Pore-loop' channels that...

