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Updated: Jun 7, 2025

Author Spotlight: Streamlining Rice Breeding with CRISPR/Cas for Obtaining Optimal Phenotypic and Agronomic Traits
Published on: January 3, 2025
Cas9-PE: a robust multiplex gene editing tool for simultaneous precise editing and site-specific random mutation in
Jinpeng Zou1, Xiangbing Meng2, Zhengyuan Hong3
1State Key Laboratory of Rice Biology and Breeding, China National Rice Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310006, China.
Researchers developed a novel Cas9-mediated prime editing (PE) system in rice. This efficient tool enables multiplex gene editing for advanced molecular breeding, overcoming previous limitations in editing multiple genes simultaneously.
Area of Science:
- Plant Science
- Molecular Biology
- Genetics
Background:
- Advanced gene editing tools are crucial for molecular design breeding, enabling simultaneous gene introduction and elimination.
- Current prime editing (PE) efficiency limits simultaneous editing of multiple mutation types.
Purpose of the Study:
- To develop a versatile and efficient multiplex gene editing system for rice molecular breeding.
- To overcome the limitations of simultaneous multi-type gene editing in plants.
Main Methods:
- Replaced Cas9 nickase (nCas9) with Cas9 to create a Cas9-mediated PE (Cas9-PE) system in rice.
- Established a transgene-free multiplex gene editing system using a co-editing strategy.
- Utilized Agrobacterium-mediated transient expression of edited ALS gene for herbicide resistance selection.
Main Results:
- The Cas9-PE system enables precise editing and site-specific random mutation in rice.
- A transgene-free multiplex gene editing system was successfully established.
- Herbicide resistance was conferred using a precisely edited ALS gene as a selection marker.
Conclusions:
- The developed Cas9-PE system is a versatile and efficient tool for multiplex gene editing in rice.
- This technology advances molecular design breeding by enabling simultaneous editing of multiple genes.
- The co-editing strategy offers a practical approach for transgene-free multiplex gene editing.
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