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A hybrid metaheuristic algorithm for antimicrobial peptide toxicity prediction.

Son Vu Truong Dao1,2, Quynh Nguyen Xuan Phan3, Ly Van Tran3

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A novel hybrid metaheuristic algorithm, h-PSOGNDO, combines Particle Swarm Optimization and Generalized Normal Distribution Optimization. This new algorithm demonstrates superior performance in solving complex mathematical and real-world problems.

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Area of Science:

  • Computational Intelligence
  • Optimization Algorithms
  • Bioinformatics

Background:

  • Developing novel algorithms is crucial for solving complex computational and real-world challenges.
  • Existing optimization algorithms have limitations in exploration and exploitation balance.
  • Hybridization of metaheuristic algorithms can potentially enhance performance.

Purpose of the Study:

  • To introduce a novel hybrid metaheuristic algorithm, h-PSOGNDO.
  • To combine the strengths of Particle Swarm Optimization (PSO) for exploitation and Generalized Normal Distribution Optimization (GNDO) for exploration.
  • To evaluate the effectiveness of h-PSOGNDO on benchmark functions and a real-world application.

Main Methods:

  • Developed a hybrid metaheuristic algorithm, h-PSOGNDO, integrating PSO and GNDO strategies.
  • Tested h-PSOGNDO on twenty-eight IEEE CEC2017 and ten IEEE CEC2019 benchmark mathematical functions.
  • Applied h-PSOGNDO to predict the toxicity of antimicrobial peptides.

Main Results:

  • h-PSOGNDO demonstrated effective performance on both sets of benchmark test functions.
  • The algorithm achieved highly competitive outcomes in predicting antimicrobial peptide toxicity.
  • Statistical findings confirm the algorithm's efficacy for complex problem-solving.

Conclusions:

  • The proposed h-PSOGNDO algorithm effectively leverages the advantages of both PSO and GNDO.
  • h-PSOGNDO shows significant potential for addressing complex optimization problems.
  • The algorithm's successful application in antimicrobial peptide toxicity prediction highlights its real-world applicability.