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Microstructure-Informed Myelin Mapping (MIMM) from routine multi-echo gradient echo data using multiscale physics
Mert Şişman1,2, Thanh D Nguyen2, Alexandra G Roberts1,2
1Department of Electrical and Computer Engineering, Cornell University, Ithaca, New York, USA.
Magnetic Resonance in Medicine
|November 18, 2024
Summary
A new MRI method, Microstructure-Informed Myelin Mapping (MIMM), accurately quantifies myelin volume fraction (MVF) from standard scans. This technique improves myelin measurement in neurodegenerative disease research without special MRI sequences.
Area of Science:
- Neuroimaging
- Biophysics
- Medical Physics
Background:
- Myelin quantification is crucial for studying demyelination in neurodegenerative diseases.
- Existing methods may have limitations in accuracy or require specialized MRI sequences.
Purpose of the Study:
- To introduce and validate Microstructure-Informed Myelin Mapping (MIMM), a novel noninvasive MRI method.
- To quantify myelin volume fraction (MVF) using a routine multi-gradient echo sequence (mGRE) and a biophysical model.
Main Methods:
- Developed a multiscale biophysical signal model incorporating myelin (Hollow Cylinder Fiber Model) and iron effects.
- Generated a dictionary of mGRE signal evolution and susceptibility using finite elements.
- Employed stochastic matching pursuit for voxel-wise MVF and iron susceptibility mapping, evaluated with and without diffusion tensor imaging (DTI) or atlas-based fiber orientation.
Main Results:
- DTI- and atlas-guided MIMM effectively reduced MVF overestimation in white matter tracts compared to basic MIMM.
- MIMM demonstrated good agreement with T2-relaxometry myelin water fraction (MWF) reference maps.
- MIMM MVF maps corrected myelin overestimation in the globus pallidus seen with three-pool complex fitting (3PCF) MWF.
Conclusions:
- MIMM processing of mGRE data provides accurate MVF maps.
- This method enables myelin quantification from routine clinical MRI scans, eliminating the need for specialized sequences.
Keywords:
hollow cylinder fiber modelmulti gradient echomyelin volume factionquantitative susceptibility mapping (QSM)stochastic matching pursuit
