Related Experiment Video
Updated: Jun 7, 2025

Genotyping Single Nucleotide Polymorphisms in the Mitochondrial Genome by Pyrosequencing
Published on: February 10, 2023
Whole mitochondrial genome sequencing and phylogenetic analysis of Gangetic mystus (Mystus cavasius)
Suvra Roy1,2, Pranaya Kumar Parida1,2, Ramya Kumar3
1Aquatic Environmental Biotechnology (AEB) Division, ICAR-CIFRI, Barrackpore, India.
Abstract:
Mystus cavasius, known as Gangetic mystus, is a freshwater indigenous catfish. The present study represents the first-ever complete mitochondrial genome sequencing of M. cavasius. The whole mitochondrial genome size is 16,554 bp (GenBank accession number OR018997). The mitogenome organization consists of total 37 genes, with 13 protein-coding genes, two rRNA, 22 tRNAs, and a D-loop regulatory region. Among these, 28 genes are coded on the heavy strand, while eight tRNA genes and ND6 are encoded separately. Phylogenetic analysis reveals that M. cavasius clusters with other Mystus species and bagrid catfishes. This work contributes valuable insights into structural characterization and phylogenetic relationships.
Related Concept Videos
Evolutionary Relationships through Genome Comparisons
Animal Mitochondrial Genetics
Gene Evolution - Fast or Slow?
In contrast, regions which code...
Multi-species Conserved Sequences
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved...

