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Updated: Jun 7, 2025

Dissection of Enhancer Function Using Multiplex CRISPR-based Enhancer Interference in Cell Lines
Published on: June 2, 2018
Small-molecule disruption of androgen receptor-dependent chromatin clusters
Sarah E Kohrt1,2, Emily J Novak2, Subhashish Tapadar3
1Cancer Genomics and Epigenomics Program, Case Comprehensive Cancer Center, Case Western Reserve University, Cleveland, OH 44106.
Abstract:
Sustained androgen receptor (AR) signaling during relapse is a central driver of metastatic castration-resistant prostate cancer (mCRPC). Current AR antagonists, such as enzalutamide, fail to provide long-term benefit for the mCRPC patients who have dramatic increases in AR expression. Here, we report AR antagonists with efficacy in AR-overexpressing models. These molecules bind to the ligand-binding domain of the AR, promote AR localization to the nucleus, yet potently and selectively down-regulate AR-target genes. The molecules BG-15a and the pharmacokinetically optimized BG-15n elicit a decrease in cell and tumor growth in vitro and in vivo in models of mCRPC. BG-15a/n treatment causes the collapse of chromatin loops between enhancers and promoters at key genes in the AR-driven epigenome. AR binding in the promoter, as well as 3D chromatin clustering, is needed for genes to respond. BG-15a/n represent promising agents for treating patients with relapsed AR-driven mCRPC tumors.
Insights
New androgen receptor (AR) antagonists, BG-15a/n, show promise for treating metastatic castration-resistant prostate cancer (mCRPC) by down-regulating AR-target genes in AR-overexpressing tumors.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Metastatic castration-resistant prostate cancer (mCRPC) is driven by sustained androgen receptor (AR) signaling.
- Current AR antagonists like enzalutamide are often ineffective in mCRPC with high AR expression.
Purpose of the Study:
- To develop novel AR antagonists effective against AR-overexpressing mCRPC.
- To investigate the molecular mechanisms underlying the action of these new agents.
Main Methods:
- Screening and characterization of novel AR antagonists (BG-15a/n).
- In vitro and in vivo studies using mCRPC models with AR overexpression.
- Analysis of AR localization, AR-target gene expression, and chromatin structure changes.
Main Results:
- BG-15a/n bind to the AR ligand-binding domain and promote nuclear localization.
- These agents potently down-regulate AR-target genes and inhibit cell/tumor growth in mCRPC models.
- Treatment disrupts enhancer-promoter chromatin loops crucial for AR-driven gene expression.
Conclusions:
- BG-15a/n demonstrate efficacy in preclinical models of relapsed AR-driven mCRPC.
- These compounds offer a potential new therapeutic strategy for mCRPC patients with high AR expression.
- The mechanism involves disruption of AR-mediated epigenetic regulation via chromatin loop collapse.
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