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Updated: Jun 7, 2025

Isolating Potentiated Hsp104 Variants Using Yeast Proteinopathy Models
Published on: November 11, 2014
Dominant negative mutations in yeast Hsp90 indicate triage decision mechanism targeting client proteins for
Julia M Flynn1, Margot E Joyce1, Daniel N A Bolon1
1Department of Biochemistry and Molecular Biotechnology, University of Massachusetts Chan Medical School, Worcester, MA 01605.
Abstract:
Dominant negative (DN) mutations provide valuable tools for investigating protein mechanisms but can be difficult to isolate because of their toxic effects. We used a mutational scanning approach to identify DN mutations in yeast Hsp90. In a previous mutational scan of the ATPase domain of Hsp90, we noticed that many mutations were at very low frequency after outgrowth in cells coexpressing wildtype Hsp90. Most of these depleted variants were located at the hinge of a lid that closes over ATP. To quantify toxic effects in the hinge regions, we performed mutational scanning using an inducible promoter and identified 113 variants with strong toxic effects. We analyzed individual DN mutations in detail and found that addition of the E33A mutation that prevents ATP hydrolysis by Hsp90 abrogated the DN phenotype. FRET assays performed on individual DN mutants indicate the linkage between ATPase activity and formation of the closed structure is disrupted. DN Hsp90 decreased the expression level of two model Hsp90 clients, glucocorticoid receptor (GR) and v-src kinase. Using MG132, we found that GR was rapidly destabilized in a proteasome-dependent manner. Biochemical analyses indicate that ATP hydrolysis by Hsp90 from open conformations can lead to ubiquitin-dependent client degradation.
Insights
Dominant negative mutations in yeast Hsp90 were identified. These mutations disrupt protein structure and client protein degradation, offering insights into Hsp90 mechanisms.
Area of Science:
- Molecular Biology
- Biochemistry
- Genetics
Background:
- Dominant negative (DN) mutations are crucial for studying protein function but challenging to isolate due to toxicity.
- Hsp90 is a molecular chaperone involved in protein folding and stability.
Purpose of the Study:
- To identify and characterize dominant negative (DN) mutations in yeast Hsp90.
- To investigate the impact of these mutations on Hsp90's ATPase activity, structure, and client protein regulation.
Main Methods:
- Mutational scanning using an inducible promoter to identify toxic variants.
- Analysis of individual DN mutations, including effects of preventing ATP hydrolysis (E33A mutation).
- Förster Resonance Energy Transfer (FRET) assays to assess structural changes.
- Assays measuring client protein expression levels (glucocorticoid receptor, v-src kinase) and degradation pathways (proteasome, MG132).
Main Results:
- Identified 113 variants with strong toxic effects, primarily in the Hsp90 hinge region.
- The E33A mutation abrogated the DN phenotype, indicating the importance of ATP hydrolysis.
- FRET assays revealed disrupted linkage between ATPase activity and Hsp90's closed conformation.
- DN Hsp90 reduced expression of client proteins (GR, v-src) and promoted their proteasome-dependent degradation.
Conclusions:
- Dominant negative mutations in yeast Hsp90 disrupt its ATPase activity and structural dynamics.
- These mutations lead to client protein destabilization and degradation, providing insights into Hsp90's role in protein homeostasis.
- The findings highlight the critical link between Hsp90's ATPase cycle and its chaperone function.
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