Related Experiment Video
Updated: Jun 6, 2025

Differentiation of a Human Neural Stem Cell Line on Three Dimensional Cultures, Analysis of MicroRNA and Putative Target Genes
Published on: April 12, 2015
Irisin-regulated lncRNAs and their potential regulatory functions in chondrogenic differentiation of human
Yijie Chen1, Wenqi Sha1, Yifan Zhang1
1Department of Otolaryngology-Head and Neck Surgery, The Second Affiliated Hospital of Xi'an Jiaotong University, Shaanxi, 710004, People's Republic of China.
Objective:
Dysregulation of chondrogenic differentiation is associated with osteoarthritis (OA). The myokine irisin is beneficial in OA treatment; yet, the underlying mechanism is not fully understood. Long noncoding RNAs (lncRNAs) act as important regulators of chondrocyte differentiation. This study was conducted to address the role of lncRNAs in mediating irisin-induced chondrocyte differentiation.
Methods:
We investigated the irisin-regulated lncRNA profile change in human mesenchymal stem cells (MSCs) using published whole transcriptome sequencing data. We predicted their potential targets and competitive endogenous RNA (ceRNA) prediction and analyzed their molecular functions using functional enrichment analysis.
Results:
More differentially expressed lncRNAs (DElncRNAs) were observed in irisin-treated samples. The top irisin-induced lncRNAs were associated with OA or chondrogenic differentiation, including XIST, PAX8-AS1, CASC15, LINC01618, and DLX6-AS1. The DEGs co-expressed with DElncRNAs were enriched in skeletal system development, extracellular matrix (ECM) organization, cell adhesion, and inflammation associated pathways. Several lncRNAs likely acted as ceRNAs to regulate downstream mRNAs including ROR2 and SORBS1 in in OA or chondrogenic differentiation.
Conclusions:
We demonstrate the global regulation of lncRNAs by irisin during chondrogenic differentiation of human MSCs. Further study is required to characterize the key irisin-regulated lncRNAs in chondrogenic differentiation.
Insights
Irisin, a myokine, influences chondrogenic differentiation by regulating long noncoding RNAs (lncRNAs) in human mesenchymal stem cells (MSCs). This study identifies key lncRNAs involved in irisin-mediated pathways relevant to osteoarthritis (OA) treatment.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Osteoarthritis (OA) involves dysregulated chondrogenic differentiation.
- The myokine irisin shows therapeutic potential for OA, but its mechanism is unclear.
- Long noncoding RNAs (lncRNAs) are critical regulators of chondrocyte differentiation.
Purpose of the Study:
- To investigate the role of lncRNAs in mediating irisin-induced chondrogenic differentiation.
- To identify irisin-regulated lncRNAs in human mesenchymal stem cells (MSCs).
Main Methods:
- Analyzed whole transcriptome sequencing data of irisin-treated human MSCs.
- Predicted lncRNA targets and competitive endogenous RNA (ceRNA) interactions.
- Performed functional enrichment analysis of differentially expressed genes (DEGs) and lncRNAs (DElncRNAs).
Main Results:
- Identified numerous differentially expressed lncRNAs (DElncRNAs) induced by irisin.
- Highlighted top irisin-induced lncRNAs (e.g., XIST, PAX8-AS1, CASC15, LINC01618, DLX6-AS1) linked to OA and chondrogenesis.
- Found DEGs co-expressed with DElncRNAs enriched in pathways for skeletal development, extracellular matrix (ECM) organization, cell adhesion, and inflammation.
- Suggested lncRNAs function as ceRNAs regulating mRNAs like ROR2 and SORBS1.
Conclusions:
- Demonstrated global regulation of lncRNAs by irisin during human MSC chondrogenic differentiation.
- Further research is needed to fully characterize the specific roles of key irisin-regulated lncRNAs in chondrogenesis.
Related Concept Videos
Mesenchymal Stem Cells
iPS Cell Differentiation
Chromatin Modification in iPS Cells
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...

