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Updated: Jun 10, 2026

11:36
Glycan Node Analysis: A Bottom-up Approach to Glycomics
Published on: May 22, 2016
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Exploring Glycan-Lectin Interactions in Natural-Like Environments: A View Using NMR Experiments Inside Cell and on
Sara Bertuzzi1, Marta G Lete1, Antonio Franconetti1
1Center for Cooperative Research in Biosciences (CIC bioGUNE), Basque Research and Technology Alliance (BRTA), 48160, Derio, Bizkaia, Spain.
Chemistry (Weinheim an Der Bergstrasse, Germany)
|November 26, 2024
Summary
Nuclear Magnetic Resonance (NMR) methods were adapted to study glycan-lectin interactions within cellular environments. This research demonstrates the feasibility of observing these crucial biological recognition events in native-like settings.
Area of Science:
- Biochemistry
- Molecular Biology
- Biophysics
Background:
- Glycan-mediated molecular recognition is vital for cellular processes.
- Nuclear Magnetic Resonance (NMR) is a key technique for studying glycan-lectin interactions in vitro.
- Existing NMR methods often use isolated components, not mimicking native cellular conditions.
Purpose of the Study:
- To develop and apply NMR methodologies for monitoring glycan-lectin interactions within cellular environments.
- To investigate glycan recognition from both receptor and ligand perspectives under native-like conditions.
- To establish proof-of-concept for NMR analysis of glycan recognition in situ.
Main Methods:
- Exploration of diverse NMR techniques, including 1H-15N HMQC NMR for intracellular observations and ligand-based STD-NMR for cell surface interactions.
- Utilized Danio Rerio oocytes for in-cell NMR experiments with galectin-7 and a glycomimetic ligand (TDG).
- Applied STD-NMR to study interactions of natural glycans and glycomimetics with cell surface-expressed Siglec-10.
Main Results:
- Successfully observed the 1H-15N HMQC NMR spectrum of folded galectin-7 inside Danio Rerio oocytes, a first for in-cell NMR of galectins.
- Demonstrated the use of a glycomimetic ligand (TDG) to facilitate intracellular galectin-7 NMR studies.
- Successfully applied STD-NMR to characterize glycan-Siglec-10 interactions on the cell surface.
Conclusions:
- NMR methodologies can be adapted to study glycan-lectin interactions in native-like cellular environments, both intracellularly and on the cell surface.
- These advanced NMR approaches provide new tools for understanding the biological roles of glycan recognition in situ.
- The study opens avenues for future NMR investigations into complex biological recognition events within their native cellular context.

