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Using Machine Learning and Feature Importance to Identify Risk Factors for Mortality in Pediatric Heart Surgery
Lorenz A Kapsner1,2, Manuel Feißt3, Ariawan Purbojo4
1Medial Informatics, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), 91058 Erlangen, Germany.
Insights
Machine learning identified key mortality risk factors after pediatric congenital heart defect (CHD) surgery. High serum creatinine levels within 72 hours post-operation were a significant predictor of mortality in children with CHDs.
Area of Science:
- Cardiology
- Medical Informatics
- Machine Learning
Background:
- Congenital heart defects (CHDs) are common congenital malformations and a leading cause of mortality from birth defects.
- Pediatric cardiac surgery for CHDs carries significant mortality risks.
- Identifying predictive factors for mortality is crucial for improving patient outcomes.
Purpose of the Study:
- To identify risk factors for mortality following surgery for congenital heart defects (CHDs) in pediatric patients.
- To apply machine learning (ML) models for predicting mortality after CHD surgery.
- To utilize model explainability tools to understand ML predictions.
Main Methods:
- Retrospective monocentric study of 1302 pediatric patients (<18 years) undergoing CHD-related cardiac surgery (2011-2020).
- Application of Random Survival Forest (RSF) and eXtreme Gradient Boosting (XGB) algorithms to model mortality.
- Validation of models on an independent holdout test dataset (40% of cohort).
- Feature importance assessment using SHapley Additive exPlanations (SHAP) and SurvSHAP(t).
Main Results:
- Both RSF and XGB models demonstrated strong predictive performance (C-indices of 0.85 and 0.79, respectively).
- Machine learning models identified maximum serum creatinine levels within 72 hours post-surgery as a critical predictor of mortality.
- Model explainability tools (SHAP, SurvSHAP(t)) confirmed the importance of early postoperative serum creatinine.
Conclusions:
- Machine learning methods effectively identify mortality risk factors in pediatric CHD surgery patients.
- Early postoperative serum creatinine is a significant modifiable risk factor for mortality.
- The analytical workflow provides a foundation for federated learning in medical research.
Abstract:
Background: The objective of this IRB-approved retrospective monocentric study was to identify risk factors for mortality after surgery for congenital heart defects (CHDs) in pediatric patients using machine learning (ML). CHD belongs to the most common congenital malformations, and remains the leading mortality cause from birth defects. Methods: The most recent available hospital encounter for each patient with an age <18 years hospitalized for CHD-related cardiac surgery between the years 2011 and 2020 was included in this study. The cohort consisted of 1302 eligible patients (mean age [SD]: 402.92 [±562.31] days), who were categorized into four disease groups. A random survival forest (RSF) and the 'eXtreme Gradient Boosting' algorithm (XGB) were applied to model mortality (incidence: 5.6% [n = 73 events]). All models were then applied to predict the outcome in an independent holdout test dataset (40% of the cohort). Results: RSF and XGB achieved average C-indices of 0.85 (±0.01) and 0.79 (±0.03), respectively. Feature importance was assessed with 'SHapley Additive exPlanations' (SHAP) and 'Time-dependent explanations of machine learning survival models' (SurvSHAP(t)), both of which revealed high importance of the maximum values of serum creatinine observed within 72 h post-surgery for both ML methods. Conclusions: ML methods, along with model explainability tools, can reveal interesting insights into mortality risk after surgery for CHD. The proposed analytical workflow can serve as a blueprint for translating the analysis into a federated setting that builds upon the infrastructure of the German Medical Informatics Initiative.
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