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Coding-Sequence Evolution Does Not Explain Divergence in Petal Anthocyanin Pigmentation Between Mimulus luteus Var
Walker E Orr1, Ji Yang Kim1, Iker J Sánchez Márquez1
1Whitman College Biology Department, Walla Walla, Washington, USA.
Evolution & Development
|November 27, 2024
Summary
Genetic evolution of flower color in Mimulus was driven by noncoding changes, not protein-coding mutations. This study reveals cis-regulatory evolution, not altered MYB5a protein function, explains novel anthocyanin pigmentation in Mimulus luteus var. variegatus.
Area of Science:
- Evolutionary Biology
- Plant Genetics
- Molecular Evolution
Background:
- Understanding genetic constraints on developmental evolution is crucial.
- Noncoding genetic changes may be favored over coding changes due to fewer pleiotropic effects.
- The evolution of novel anthocyanin pigmentation in Mimulus luteus var. variegatus provides a model for studying genetic mechanisms of trait evolution.
Purpose of the Study:
- To investigate the role of coding-sequence changes in the recent evolution of anthocyanin pigmentation in Mimulus.
- To determine if MYB5a/NEGAN protein evolution contributed to increased anthocyanin production in M. luteus var. variegatus.
- To differentiate between coding and noncoding contributions to a novel plant trait.
Main Methods:
- Quantitative image analysis of anthocyanin production in tobacco leaves transfected with MYB5a alleles from different Mimulus taxa.
- Replication of initial experiments and spectrophotometry analysis of extracted anthocyanins.
- Investigation of post-transcriptional editing sites in the MYB5a gene.
Main Results:
- Both MYB5a alleles from Mimulus luteus and M. luteus var. variegatus drove robust anthocyanin production.
- Unexpectedly, the allele from the low-anthocyanin M. l. luteus resulted in significantly higher anthocyanin production.
- Two potential post-transcriptional editing sites were discovered in the MYB5a gene sequence.
Conclusions:
- The gain of petal lobe anthocyanin pigmentation in M. luteus var. variegatus resulted solely from noncoding cis-regulatory evolution, not protein-coding changes.
- The MYB5a protein sequence itself did not drive the increase in anthocyanin production.
- The discovery of post-transcriptional editing in nuclear-encoded plant mRNA opens new avenues for research.
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