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Updated: Jun 6, 2025

Application of Deep Learning-Based Medical Image Segmentation via Orbital Computed Tomography
Published on: November 30, 2022
Impact of uncertainty quantification through conformal prediction on volume assessment from deep learning-based MRI
Marius Gade1, Kevin Mekhaphan Nguyen1, Sol Gedde2
1Department of Electrical Engineering and Computer Science, University of Stavanger, Stavanger, Norway.
Objectives:
To estimate the uncertainty of a deep learning (DL)-based prostate segmentation algorithm through conformal prediction (CP) and to assess its effect on the calculation of the prostate volume (PV) in patients at risk of prostate cancer (PC).
Methods:
Three-hundred seventy-seven multi-center 3-Tesla axial T2-weighted exams from biopsied males (66.64 7.47 years) at risk of PC were retrospectively included in the study. Assessment of PV based on PI-RADS 2.1 ellipsoid formula ( ) was available for included patients. Prostate segmentations were obtained from a DL model and used to calculate the PV ( ). CP was applied at a confidence level of 85% to flag unreliable pixel segmentations of the DL model. Subsequently, the PV ( ) was calculated when disregarding uncertain pixel segmentations. Agreement between and was evaluated against the reference standard . Intraclass correlation coefficient (ICC) and Bland-Altman plots were used to assess the agreement. The relative volume difference (RVD) was used to evaluate the PV calculation accuracy, and the Wilcoxon Signed-Rank Test was used to assess statistical differences. A p-value < 0.05 was considered statistically significant.
Results:
Conformal prediction significantly reduced RVD when compared to the DL algorithm (RVD = - 2.81 8.85 and RVD = -8.01 11.50). showed a significantly larger agreement than when using the reference standard (mean difference (95% limits of agreement) : 1.27 mL (- 13.64; 16.17 mL) : 6.07 mL (- 14.29; 26.42 mL)), with an excellent ICC ( : 0.97 (95% CI: 0.97 to 0.98)).
Conclusion:
Uncertainty quantification through CP increases the accuracy and reliability of DL-based PV assessment in patients at risk of PC.
Critical Relevance Statement:
Conformal prediction can flag uncertain pixel predictions of DL-based prostate MRI segmentation at a desired confidence level, increasing the reliability and safety of prostate volume assessment in patients at risk of prostate cancer.
Key Points:
Conformal prediction can flag uncertain pixel predictions of prostate segmentations at a user-defined confidence level. Deep learning with conformal prediction shows high accuracy in prostate volumetric assessment. Agreement between automatic and ellipsoid-derived volume was significantly larger with conformal prediction.
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