Related Experiment Video
Updated: Jul 8, 2026

Determination of Protein-ligand Interactions Using Differential Scanning Fluorimetry
Published on: September 13, 2014
Evaluating and Validating the Fluorescent Probe Methodology for Measuring the Effective Hydrophobicity of Protein,
Nattawan Chorhirankul1, Anja E M Janssen1, Remko M Boom1
1Food Process Engineering Group, Wageningen University, P.O. Box 17, Wageningen 6700 AA, The Netherlands.
Abstract:
The fluorescent probe method with 8-anilino-1-naphthalenesulfonic acid ammonium salt (ANSA) and 6-propionyl-2-(N,N-dimethylamino) naphthalene (PRODAN) was validated to determine the effective hydrophobicity of the whey protein isolate. The focus was on charge and hydrophobic interactions due to the complexation between the proteins and probes. Using ANSA could overestimate the effective hydrophobicity of positively charged proteins. Furthermore, the relative fluorescence intensities (RFIs) should be considered before determining the effective hydrophobicity by linear regression. This is to be confident that the obtained RFI mainly originates from the hydrophobic interaction. The validated protocol was then applied to protein hydrolyzate and amino acids to investigate the method's reliability for small molecules. Adding ANSA or PRODAN probes to solutions containing protein hydrolyzates (60-10,000 Da), or the amino acids, tryptophan, glutamic acid, and lysine (∼165.85 Da), did not affect RFI. The effective hydrophobicity of those small constituents, therefore, could not be determined by these probes.
More Related Videos
08:34A Rapid and Quantitative Fluorimetric Method for Protein-Targeting Small Molecule Drug Screening
Published on: October 16, 2015
10:31Residue-Specific Exchange of Proline by Proline Analogs in Fluorescent Proteins: How "Molecular Surgery" of the Backbone Affects Folding and Stability
Published on: February 3, 2022
Related Concept Videos
Western Blotting
The technique begins with separating proteins from the sample using sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), followed by protein transfer, immunoblotting, and finally, protein detection.
Methods to Assess Microbial Populations