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Updated: Jun 29, 2026

How to Measure Cortical Folding from MR Images: a Step-by-Step Tutorial to Compute Local Gyrification Index
Published on: January 2, 2012
Fetal gestational age prediction via shape descriptors of cortical development
Tommaso Ciceri1,2, Letizia Squarcina3, Alessandra Bertoldo2,4
1NeuroImaging Lab, Scientific Institute IRCCS Eugenio Medea, Bosisio Parini, Italy.
Introduction:
Gyrification is the intricate process through which the mammalian cerebral cortex develops its characteristic pattern of sulci and gyri. Monitoring gyrification provides valuable insights into brain development and identifies potential abnormalities at an early stage. This study analyzes the cortical structure in neurotypical and pathological (spina bifida) fetuses using various shape descriptors to shed light on the gyrification process during pregnancy.
Methods:
We compare morphometric properties encoded by commonly used scalar point-wise curvature-based signatures-such as mean curvature (H), Gaussian curvature (K), shape index (SI), and curvedness (C)-with multidimensional point-wise shape signatures, including spectral geometry processing methods like the Heat Kernel Signature (HKS) and Wave Kernel Signature (WKS), as well as the Signature of Histograms of Orientations (SHOT), which combines histogram and signature techniques. These latter signatures originate from computer graphics techniques and are rarely applied in the medical field. We propose a novel technique to derive a global descriptor from a given point-wise signature, obtaining GHKS, GWKS, and GSHOT. The extracted signatures are then evaluated using Support Vector Regression (SVR)-based algorithms to predict fetal gestational age (GA).
Results:
GSHOT better encodes the GA to other global multidimensional point-wise shape signatures (GHKS, GWKS) and commonly used scalar point-wise curvature-based signatures (C, H, K, SI, FI), achieving a prediction R 2 of 0.89 and a mean absolute error of 6 days in neurotypical fetuses, and a R 2 of 0.64 and a mean absolute error of 10 days in pathological fetuses.
Conclusion:
GSHOT provides researchers with an advanced tool to capture more nuanced aspects of fetal brain development and, specifically, of the gyrification process.
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