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Updated: Jun 5, 2025

Oligopeptide Competition Assay for Phosphorylation Site Determination
Published on: May 18, 2017
Phosphorylation of 'SDT-like' motifs in ATRX mediates its interaction with the MRN complex and is important for ALT
Tomas Goncalves1,2, Harshangda Bhatnagar3, Siobhan Cunniffe3
1MRC Molecular Haematology Unit, Weatherall Institute of Molecular Medicine, University of Oxford, Oxford OX3 9DS, UK.
Abstract:
Approximately 10-15% of human cancers are telomerase-negative and maintain their telomeres through a recombination-based process known as the alternative lengthening of telomeres (ALT) pathway. Loss of the alpha-thalassemia/mental retardation, X-linked (ATRX) chromatin remodeller is a common event in ALT-positive cancers, but is generally insufficient to drive ALT induction in isolation. We previously demonstrated that ATRX binds to the MRN complex, which is also known to be important in the ALT pathway, but the molecular basis of this interaction remained elusive. Here, we demonstrate that the interaction between ATRX and MRN is dependent on the N-terminal forkhead-associated and BRCA1 C-terminal domains of NBS1, analogous to the previously reported NBS1-MDC1 interaction. A number of conserved 'SDT-like' motifs (serine and threonine residues with aspartic/glutamic acid residues at proximal positions) in the central unstructured region of ATRX were found to be crucial for the ATRX-MRN interaction. Furthermore, treatment with a casein kinase 2 inhibitor prevented the ability of ATRX to bind MRN, suggesting that phosphorylation of these residues by casein kinase 2 is also important for the interaction. Finally, we show that a functional ATRX-MRN interaction is important for the ability of ATRX to prevent induction of ALT hallmarks in the presence of chemotherapeutically induced DNA-protein crosslinks, and might also have implications for individuals with ATR-X syndrome.
Insights
Loss of ATRX protein in cancers can activate the alternative lengthening of telomeres (ALT) pathway. This study reveals how ATRX interacts with the MRN complex, crucial for ALT, and its role in preventing ALT hallmarks.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- 10-15% of human cancers are telomerase-negative and utilize the alternative lengthening of telomeres (ALT) pathway.
- Loss of the alpha-thalassemia/mental retardation, X-linked (ATRX) chromatin remodeler is frequent in ALT-positive cancers but insufficient alone to induce ALT.
- The interaction between ATRX and the MRN complex, vital for ALT, was previously observed but lacked molecular detail.
Purpose of the Study:
- To elucidate the molecular mechanisms underlying the interaction between ATRX and the MRN complex.
- To investigate the role of specific ATRX domains and post-translational modifications in this interaction.
- To determine the functional significance of the ATRX-MRN interaction in preventing ALT pathway activation.
Main Methods:
- Investigated ATRX-MRN interaction using domain mapping of NBS1.
- Identified critical 'SDT-like' motifs in ATRX's central region.
- Utilized casein kinase 2 inhibition to assess the role of phosphorylation.
- Assessed ATRX's function in preventing ALT hallmarks in response to DNA-protein crosslinks.
Main Results:
- The ATRX-MRN interaction depends on NBS1's N-terminal forkhead-associated and BRCA1 C-terminal domains.
- Conserved 'SDT-like' motifs within ATRX's central unstructured region are essential for MRN binding.
- Casein kinase 2 inhibition disrupts ATRX-MRN binding, indicating phosphorylation is key.
- A functional ATRX-MRN interaction is necessary for ATRX to suppress ALT hallmarks induced by DNA-protein crosslinks.
Conclusions:
- The study defines the molecular basis of the ATRX-MRN interaction, involving specific NBS1 domains and phosphorylated ATRX motifs.
- This interaction is critical for ATRX's tumor-suppressive function against ALT pathway activation.
- Findings have implications for understanding ATR-X syndrome and developing targeted cancer therapies.
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